Input parameters:

  Query = ENSDARP00000010862 (Len=249)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000010862, Len=249):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSELEQLRQEAEQLRNQIRDARKACSDSSLSQITAGLDSVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLI 80  
WD40-rpts                                                  (_________________WD 1______________

Query       81 VWDSYTTNKIHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYSLKTREGNVRVTRELPGHTGYLSCCRFLDDSQIVTS 160 
WD40-rpts      __)   (_________________WD 2________________)       (________________WD 3_______

Query      161 SGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDSKTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVCVSFKVGS 240 
WD40-rpts      _________)   (_________________WD 4________________)   (______________WD 5______

Query      241 PHQCLILVY 249 
WD40-rpts      ________)

5 WD40-repeats found in QUERY=ENSDARP00000010862 (Len=249):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    45-83       9.69  515.12  7.1e-06       37.5%     51.80
  WD 2:  Seg  7    87-125      8.96  484.62  1.8e-05       15.0%     52.18
  WD 3:  Seg 11   133-170      7.91  441.39  7.0e-05       32.5%     45.90
  WD 4:  Seg 15   174-212     10.62  553.19  2.2e-06       45.0%     55.04
  WD 5:  Seg 18   216-249      4.71  309.31  0.00422       25.0%     25.84

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   45-83     MRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIVWD
   WD 2   87-125    TNKIHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYS
   WD 3  133-170    VRVTRELPGHTGYLSCCRFLDDSQ-IVTSSGDTTCALWD
   WD 4  174-212    GQQTTTFTGHSGDVMSLSLSPDSKTFVSGACDASSKLWD
   WD 5  216-249    GMCRQSFTGHVSDINAVCVSFK----VGSPHQCLILVY-

   WD40 Template    GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD