Input parameters:

  Query = ENSDARP00000011435 (Len=355)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000011435, Len=355):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAAQEEPAQPGDSLATLKSESDTLKSKLEEERAKLHDVELHQVAEKIEALGQFVMKTRRTLKGHGNKVLCMDWCKDKRRI 80  
WD40-rpts      (________________WD 1_______________)                 (_________________WD 2____

Query       81 VSSSQDGKVIVWDAFTTNKEHAVTMPCTWVMACAYAPSGCAVACGGLDNKCSVYPLSLDKNENLAAKKKSVAMHTNYLSA 160 
WD40-rpts      ____________)   (_________________WD 3________________)         (_______________

Query      161 CCFTNSDMQILTSSGDGTCALWDVESGQMLQSFHGHAADVLCLDLAPSETGNTFVSGGCDKKACVWDMRTGQCVQSFESH 240 
WD40-rpts      __WD 4________________)   (__________________WD 5_________________)   (_________

Query      241 DSDINSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFGGYNDYTINVWDVLKGARV 320 
WD40-rpts      ________WD 6________________)   (__________________WD 7_________________)   (___

Query      321 SILFGHENRVSTLRVSPDGTAFCSGSWDHTLRIWA 355 
WD40-rpts      ______________WD 8________________)

8 WD40-repeats found in QUERY=ENSDARP00000011435 (Len=355):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-37       7.16  410.50  0.00018       15.0%     26.57
  WD 2:  Seg  4    55-93       9.96  526.06  5.1e-06       40.0%     53.17
  WD 3:  Seg  8    97-135      8.44  463.49  3.5e-05       15.0%     56.56
  WD 4:  Seg 12   145-183      8.77  476.88  2.3e-05       22.5%     52.48
  WD 5:  Seg 16   187-227      8.75  476.31  2.4e-05       35.0%     55.09
  WD 6:  Seg 20   231-269     10.38  543.54  2.9e-06       35.0%     53.09
  WD 7:  Seg 24   273-313      8.16  451.75  5.1e-05       37.5%     57.99
  WD 8:  Seg 28   317-355      9.79  518.95  6.3e-06       37.5%     50.68

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-37     --MAAQEEPAQ--PGDSLATLKSE--SDTLKSKLEEERAKLHD
   WD 2   55-93     MKTRRTLKGHG--NKVLCMDWCKD--KRRIVSSSQDGKVIVWD
   WD 3   97-135    TNKEHAVTMPC--TWVMACAYAPS--GCAVACGGLDNKCSVYP
   WD 4  145-183    AAKKKSVAMHT--NYLSACCFTNS--DMQILTSSGDGTCALWD
   WD 5  187-227    GQMLQSFHGHA--ADVLCLDLAPSETGNTFVSGGCDKKACVWD
   WD 6  231-269    GQCVQSFESHD--SDINSVRYYPS--GDAFASGSDDATCRLYD
   WD 7  273-313    DREVAIYSKESIIFGASSVDFSLS--GRLLFGGYNDYTINVWD
   WD 8  317-355    GARVSILFGHE--NRVSTLRVSPD--GTAFCSGSWDHTLRIWA

   WD40 Template    GECLRTLSGHT--SGVTSVSFSPD--GKRLVSGSEDGTIKVWD