Input parameters:

  Query = ENSDARP00000012565 (Len=193)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000012565, Len=193):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGKQNSKLRPEMLQDLRENTEFTDHELQEWYKGFLKDCPSGHLNVEEFKKIYANFFPYGDASKFAEHVFRTFDTNNDGTI 80  
WD40-rpts      (__________________________________________________________________WD 1_________

Query       81 DFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISREEMLEIVQAIYKMVSSVMKMPEDESTPEKRTDKIFRQMDLNN 160 
WD40-rpts      ________________________________________________________)                       

Query      161 DGKLSLEEFIKGAKSDPSIVRLLQCDPSSASQF 193 
WD40-rpts                                       

1 WD40-repeats found in QUERY=ENSDARP00000012565 (Len=193):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-137      2.92  235.39  0.04109       27.5%     -9.60

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-137    MGKQNSKLRPEMLQDLRENTEFTDHELQEWYKGFLKDCPSGHLNVEEFKKIYANFFPYGDASKFAEHVFRTFDTNNDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISREEMLEIVQAIYKMVSSVMK

   WD40 Template    TGECLRTLS-------------------------------GHTS------------GVTSVS-----------FSPDGKRL-----------VSGS---------------EDGTIK-----------------VWD