Input parameters:

  Query = ENSDARP00000014182 (Len=533)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000014182, Len=533):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTITKMTWRPQYRSSKYRHVFGKPATKENCYDGVPITRSVHDNQLCAANPRFIAVITECAGGGSFLVLPVHHTGKVDPHH 80  
WD40-rpts                                                                                  (___

Query       81 PKVSGHRGNVLDIKWNHFNDFCIASCSEDATVKIWEIPEHGVLKTITVPWKELQGHSRRVGLIEWHPTANNIIFSTGYDY 160 
WD40-rpts      ______________WD 1_________________)         (__________________WD 2____________

Query      161 QVMVWKLDVPEQVIKNPVRSISVHSDVVLSMSFNTDGSKLATSCKDKKIRVIDPRTGTILQETNCKSHKASKVLFLGNLK 240 
WD40-rpts      _____)            (_______________WD 3______________)   (___________________WD 4

Query      241 MLLSTGNSRWNHRQIALWDQEDLSQPSYSEDLDGSSGVLFPFYDPDTHMLYIAGKGDGNIRYYEISPEKPYVHYLTEYRS 320 
WD40-rpts      __________________)(____________________WD 5___________________) (______________

Query      321 HLPQKGMGVMPKRGLDVCSCEIFRFYKLVTIKSLIEPLSMIVPRRSESYQEDIYPMTAGNKPAMTANEWISGLDKGPVMM 400 
WD40-rpts      ____WD 6__________________)                                                     

Query      401 SLRPGSKVDTYVELGLKKSPMESTEMHNSRSQPGLSQLIQRLETKDGNGRKESHPTLLLPSTEENGSSASHVSNGQLDSP 480 
WD40-rpts                                                                                      

Query      481 HCSPPKTENELRQMFYKQQEEIRKMRELLNQKDVRIKQLELEIKNVRNSQAPL 533 
WD40-rpts                                                           

6 WD40-repeats found in QUERY=ENSDARP00000014182 (Len=533):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6    77-116      7.00  403.97  0.00022       27.5%     44.51
  WD 2:  Seg 11   126-166      7.88  440.28  7.2e-05       22.5%     45.29
  WD 3:  Seg 14   179-213      8.16  451.65  5.1e-05       35.0%     49.14
  WD 4:  Seg 17   217-259      5.45  339.95  0.00163       25.0%     48.80
  WD 5:  Seg 21   260-304      4.28  291.59  0.00730       25.0%     35.56
  WD 6:  Seg 25   306-347      4.37  295.08  0.00655       12.5%     36.30

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   77-116    -DP--HHPKVSGH----RGNVLDIKWNHFNDFC-I-ASCS----EDATVKIWE
   WD 2  126-166    ITV--PWKELQGH----SRRVGLIEWHP-TANNII-FSTG----YDYQVMVWK
   WD 3  179-213    -------RSISVH----SDVVLSMSFNT-DGSK-L-ATSC----KDKKIRVID
   WD 4  217-259    -GT--ILQETNCK----SHKASKVLFLG-NLKM-L-LSTGNSRWNHRQIALWD
   WD 5  260-304    QED--LSQPSYSEDLDGSSGVLFPFYDP-DTHM-LYIAGK----GDGNIRYYE
   WD 6  306-347    SPEKPYVHYLTEY----RSHLPQKGMGV-MPKR-G-LDVC----SCEIFRFYK

   WD40 Template    TGE--CLRTLSGH----TSGVTSVSFSP-DGKR-L-VSGS----EDGTIKVWD