Input parameters:

  Query = ENSDARP00000015105 (Len=368)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000015105, Len=368):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSLFGTNTGFGSGGTGVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGGSWANDVRCWEVQDNGQTVPK 80  
WD40-rpts                           (______________________WD 1_____________________)(_________

Query       81 AQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHEGPIRTIHWIKAPNYSCIMTGSWDKTLKFWDTRS 160 
WD40-rpts      __________WD 2___________________)  (__________________WD 3_________________)   

Query      161 PNPMMSLQMPERCYCADVVYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQSKPTGFALGSIEGRV 240 
WD40-rpts      (________________WD 4________________)   (___________________WD 5_______________

Query      241 AIHYINPPNPAKDNFTFKCHRSNGTNTATPQDIYAVNAISFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPITA 320 
WD40-rpts      ___)                (__________________WD 6_________________)   (_______________

Query      321 CCFNHNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAEELKPRNKK 368 
WD40-rpts      __WD 7________________)                         

7 WD40-repeats found in QUERY=ENSDARP00000015105 (Len=368):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    22-70       7.11  408.37  0.00020       25.0%     53.56
  WD 2:  Seg  7    71-114      8.76  476.46  2.4e-05       32.5%     49.95
  WD 3:  Seg 10   117-157      7.45  422.34  0.00013       22.5%     54.76
  WD 4:  Seg 14   161-198      4.29  291.99  0.00721        5.0%     38.47
  WD 5:  Seg 18   202-244      5.10  325.20  0.00258       20.0%     50.45
  WD 6:  Seg 23   261-301      7.57  427.32  0.00011       25.0%     37.35
  WD 7:  Seg 26   305-343      7.46  422.83  0.00012       17.5%     52.36

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   22-70     TTD----SHNPMKDVEV-TSPPDDSISCLAF--SPPTMPGNF----LIGGSWANDVRCWE
   WD 2   71-114    VQDNGQTV------PKA-QQMHTGPVLDVCW--SDD---GSK----VFTASCDKTAKMWD
   WD 3  117-157    -SN----Q------AIQ-IAQHEGPIRTIHWIKAPN---YSC----IMTGSWDKTLKFWD
   WD 4  161-198    -PN----P------MMS-LQMPERCYCADVV--YPM---A-V----VATAERGLIVYQLE
   WD 5  202-244    -SE----F------RRI-ESPLKHQHRCVAI--FKD---KQSKPTGFALGSIEGRVAIHY
   WD 6  261-301    RSN----G------TNTATPQDIYAVNAISF--HPV---HGT----LATVGSDGRFSFWD
   WD 7  305-343    -RT----K------LKT-SEQLDQPITACCF--NHN---GNI----FAYASSYDWSKGHE

   WD40 Template    TGE----C------LRT-LSGHTSGVTSVSF--SPD---GKR----LVSGSEDGTIKVWD