Input parameters:

  Query = ENSDARP00000017420 (Len=678)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000017420, Len=678):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 TLSNWVYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKQILAIIRWKYMIVDEGHRMKNHHCKL 80  
WD40-rpts                                                                                      

Query       81 TQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLR 160 
WD40-rpts                                                                                      

Query      161 PFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLKYTIMQLRKICNHPYMFQ 240 
WD40-rpts                                                                                      

Query      241 QIEESFSEHLGFSGGIVLDLYRASGKFEVLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDGTTKAEDR 320 
WD40-rpts                                                                     (________________

Query      321 GMLLKTFNDPASQYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQLNEVRVLRLCTVNSVEEKIL 400 
WD40-rpts      __________WD 1_________________________)                                        

Query      401 AAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVPDDETVNQMIARSEDEFDQFMRMDLDRRREEARNPK 480 
WD40-rpts                                                                                      

Query      481 RKPRLMEEDELPTWIMKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLLSLQAIEDGTLEEIEEEVRHRKS 560 
WD40-rpts                                                                                      

Query      561 ARKRRRDRDRDPDSVPSTSARAGGRERDDDSKRQKKRGRPPTEKLSPNPPALTKKMKKIVDAVIKYKEKCVVLQVSGSPG 640 
WD40-rpts                                                                                      

Query      641 ILCRGGEGGRQLSEVFIQLPSRKELPEYYELIRKPVDF 678 
WD40-rpts                                            

1 WD40-repeats found in QUERY=ENSDARP00000017420 (Len=678):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7   304-360      2.79  230.02  0.04835       25.0%     30.34

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  304-360    RNFKYLRLDGTTKAEDRGMLLKTFNDPASQYFIFLLSTRAGGLGLNLQSAD-TVIIFD

   WD40 Template    TGECLRTLSGHTS------------------GVTSVSFSPDGKRLVSGSEDGTIKVWD