Input parameters:

  Query = ENSDARP00000017497 (Len=527)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000017497, Len=527):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEDKTLEQMNTSVMDPQTADRSPKITLIKSTFICPQVSNGPLTGSRKRPSEGNYEKEKDVCIQLFDQWSEADQVEFVEHL 80  
WD40-rpts                                                                                      

Query       81 ISRMCHYQHGHINSYLKPMLQRDFITALPAQGLDHIAENILSFLDARSLCSAELVCKEWQRVISEGMLWKKLIERMVRTD 160 
WD40-rpts                                                                                      

Query      161 PLWKGLSERHQWEKYLFKNRTTEVPPNSYYRSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIIS 240 
WD40-rpts                                                          (_________________WD 1______

Query      241 GLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFCNGLMVT 320 
WD40-rpts      __________)   (________________WD 2_______________)   (________________WD 3_____

Query      321 CSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL 400 
WD40-rpts      __________)(___________________WD 4__________________)   (________________WD 5__

Query      401 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRV 480 
WD40-rpts      _____________)   (________________WD 6_______________)            (_____________

Query      481 FRLQFDEFQIISSSHDDTILIWDFLNVSTNGQTEGRSPSRTYTYISR 527 
WD40-rpts      ___WD 7_______________)                        

7 WD40-repeats found in QUERY=ENSDARP00000017497 (Len=527):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1   213-251      6.55  385.15  0.00040       22.5%     51.01
  WD 2:  Seg  5   255-291      8.91  482.71  1.9e-05       42.5%     49.03
  WD 3:  Seg  9   295-331      7.88  440.22  7.3e-05       37.5%     50.57
  WD 4:  Seg 13   332-374      7.73  434.11  8.8e-05       45.0%     45.01
  WD 5:  Seg 16   378-414      8.56  468.17  3.0e-05       40.0%     51.71
  WD 6:  Seg 20   418-454      9.08  489.87  1.6e-05       55.0%     54.76
  WD 7:  Seg 24   467-503      7.27  414.94  0.00016       40.0%     49.42

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  213-251    -HN-----LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWD
   WD 2  255-291    -LE-----CLKILTGHTGSVLCLQY--DERVIVTGSSDSTVRVWD
   WD 3  295-331    -GE-----VLNTLIHHNEAVLHLRFC--NGLMVTCSKDRSIAVWD
   WD 4  332-374    MASPTDISLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWS
   WD 5  378-414    -CE-----FVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWD
   WD 6  418-454    -GA-----CLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD
   WD 7  467-503    -TL-----CLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD

   WD40 Template    TGE-----CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD