Input parameters:

  Query = ENSDARP00000017792 (Len=325)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000017792, Len=325):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKPILLQGHERSITQIKYNREGDLLFSVAKDPIANVWYSVNGERLGTYNGHTGAVWCVDVDWDTKNVLTGSADNSCRLWD 80  
WD40-rpts      (________________WD 1________________)   (_________________WD 2________________)

Query       81 CETGKQLALLETSSAVRTCGFDFSGNIIMFSTDKQMGYQCFLNYYDLRDPQQIEDNQPYISVPCSESKITSAVWGPLGEF 160 
WD40-rpts         (___________________WD 3__________________)         (_________________WD 4___

Query      161 VIAGHENGEINQFSAKSGEVLKKAKEHTKQINDIQSSVDLTMIISASKDCTAKMFDSSTLEHVKTFKTERPVNSAAISPI 240 
WD40-rpts      _____________)   (_________________WD 5________________)   (________________WD 6

Query      241 MDHVVMGGGQEAMEVTTTSTRIGKFEARFFHAAYEEEFGRVKGHFGPINCVAFHPDGKSYSSGGEDGYVRIHYFDPHYFD 320 
WD40-rpts      ________________)                 (_________________WD 7________________)       

Query      321 FELEA 325 
WD40-rpts           

7 WD40-repeats found in QUERY=ENSDARP00000017792 (Len=325):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-38       8.62  470.94  2.8e-05       27.5%     51.75
  WD 2:  Seg  5    42-80      10.31  540.64  3.2e-06       40.0%     53.98
  WD 3:  Seg  9    84-126      5.48  340.85  0.00159       20.0%     58.46
  WD 4:  Seg 13   136-174      8.14  451.01  5.2e-05       22.5%     53.88
  WD 5:  Seg 17   178-216      9.73  516.64  6.8e-06       32.5%     55.30
  WD 6:  Seg 21   220-257      6.84  397.13  0.00028       22.5%     53.20
  WD 7:  Seg 26   275-313      9.83  520.87  5.9e-06       35.0%     54.12

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-38     MKPIL--LQGHERSITQIKYNREGDLLFSVAKDPI-----ANVWY
   WD 2   42-80     -GERLGTYNGHTGAVWCVDVDWDTKNVLTGSADNS-----CRLWD
   WD 3   84-126    -GKQLALLETS-SAVRTCGFDFSGNIIMFSTDKQMGYQCFLNYYD
   WD 4  136-174    -NQPYISVPCSESKITSAVWGPLGEFVIAGHENGE-----INQFS
   WD 5  178-216    -GEVLKKAKEHTKQINDIQSSVDLTMIISASKDCT-----AKMFD
   WD 6  220-257    -LEHVKTFKTERP-VNSAAISPIMDHVVMGGGQEA-----MEVTT
   WD 7  275-313    -EEEFGRVKGHFGPINCVAFHPDGKSYSSGGEDGY-----VRIHY

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGT-----IKVWD