Input parameters:

  Query = ENSDARP00000017894 (Len=632)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000017894, Len=632):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MREKLSLWAIFCLVVAFLPSQTESVAVMSVDLGSEWMKVAIVKPGVPMEIVLNKESRRKTPVAVCLKENERLFGDGALGV 80  
WD40-rpts                                                                                      

Query       81 AVKNPKVVYRFLQSILGKTADNPQVAEYQKHFPEHQLQKDEKRGTVYFKFSEEMQYTPEELLGMILNYSRTLAQDFAEQP 160 
WD40-rpts                                                       (______________________________

Query      161 IKDAVITVPAYFNQAERRAVLQAAHIAGLKVLQLINDNTAVALNYGVFRRKDINSTAQNIMFYDMGSGSTTATIVTYQTV 240 
WD40-rpts      _______________WD 1____________________________________________)                

Query      241 KTKESGTQPQLQIRGVGFDRTLGGFEMELRLRDHLAKLFNEQKKSKKDVRDNLRAMAKLLKEAQRLKTVLSANAEHTAQI 320 
WD40-rpts                                                                                      

Query      321 EGLMDDIDFKAKVTRSEFEALCEDLFDRVPGPVKQALAAAEMSMDEIEQVILVGGATRVPKVQDVLLKSVGKEELSKNIN 400 
WD40-rpts                                                                                      

Query      401 ADEAAAMGAVYQAAALSKAFKVKPFLVRDAAVFPIQVEFSRETEEEDGVKSLKHNKRILFQRMAPYPQRKVITFNRYIDD 480 
WD40-rpts                                                                                      

Query      481 FVFYINYGDLSFLSEQDMKVFGSQNLTTVKLSGVGSSFKKHSDAESKGIKAHFNMDESGVLILDRVESVFETIVEEKEEE 560 
WD40-rpts                                                                                      

Query      561 STLTKLGNTISSLFGGGSSEPSANVTEPVTDEEEVTPEAGKEQDQPEKQEETVQEKPETEEGKEAEPQAEEQ 632 
WD40-rpts                                                                              

1 WD40-repeats found in QUERY=ENSDARP00000017894 (Len=632):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7   130-224      2.79  230.11  0.04822       17.5%      9.50

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  130-224    FSEEMQYTPEELLGMILNYSRTLAQDFAEQPIKDAVITVPAYFNQAERRAVLQAAHIAGLKVLQLINDNTAVALNYGVFRRKDINSTAQNIMFYD

   WD40 Template    TGECLRTL---------------------SGHTSGVTSVSFSPD----------------------------------GKRLVSGSEDGTIKVWD