Input parameters:

  Query = ENSDARP00000018027 (Len=661)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000018027, Len=661):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAAVCAASRVLGTKILSCKSLPAVCQANRQLHFSIYGKRGDAKISDGVSNQYPVVDHEFDAVVVGAGGAGLRAAFGLSEA 80  
WD40-rpts                                                               (______________________

Query       81 GFNTACVTKLFPTRSHTVAAQGGINAALGNMEQDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRT 160 
WD40-rpts      ___________WD 1________________________________)                                

Query      161 DDGKIYQRAFGGQSLKFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMEDGECKGVIALCMEDGS 240 
WD40-rpts                                                                                      

Query      241 IHRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSEG 320 
WD40-rpts                                                                                      

Query      321 ERFMERYAPNAKDLASRDVVSRSMTIEIREGRGVGPDKDHVHLQLHHLPPQQLAARLPGISETAMIFAGVDVTKEPIPVL 400 
WD40-rpts                                                                                      

Query      401 PTVHYNMGGIPTNYKGQVITYKDGQDHVVPGLYACGEAGCASVHGANRLGANSLLDLVVFGRACALTIAEIDTPGEKLSP 480 
WD40-rpts                                                                                      

Query      481 LKPNAGEASVANLDKMRYANGSTRTSEIRLNMQKTMQSHAAVFRTGDVLKEGCVKMESVYKSMDDIKTFDRGIVWNTDLV 560 
WD40-rpts                                                                                      

Query      561 ETLELQNLMLNAVQTIVSAEARKESRGAHAREDFKDRVDEYDYSKPLQGQVKKPFEQHWRKHTLSYVDPETGKVTLEYRP 640 
WD40-rpts                                                                                      

Query      641 VIDSSLDAEDCAAIPPAIRSY 661 
WD40-rpts                           

1 WD40-repeats found in QUERY=ENSDARP00000018027 (Len=661):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    58-128      2.90  234.30  0.04247       20.0%     -3.62

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   58-128    EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEQDDWRWHFYDTVKGSD

   WD40 Template    TGECLRTLSG---------------HTSGVTSVSFSPDG---------KRLVSGSEDGT-------IKVWD