Input parameters:

  Query = ENSDARP00000018130 (Len=1635)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000018130, Len=1635):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLVKIWATDDGHLLATLRGHAAEISDMAVNYENTLLAAGSCDKMIRVW 80  
WD40-rpts          (_______________WD 1______________)   (_________________WD 2________________

Query       81 CLQTCAPLAVLEGHAASITSLQFSPLCSGNKRFLSSTGADGTICFWQWDARTLKFGQRPSKFIERPRPGVQMICSSFSAG 160 
WD40-rpts      )(____________________WD 3____________________)             (________________WD 

Query      161 GMFLATGSTDHIIRVYYFGGGQPEKISELESHTDKVDSIQFSHSGDRFVSGSRDGTARIWQLQQQDWRSILLDMATKLPG 240 
WD40-rpts      4_______________)(___________________WD 5___________________)                   

Query      241 KYNPPPLEDKVTKLKVTMVAWDCNDNTVITAANNLTLKVWNSYTGNLIHVLMGHEDEVFVLEPHPFDSRVLFSAGHDGNA 320 
WD40-rpts        (_________________WD 6________________)   (_________________WD 7______________

Query      321 IVWDLARGVKIRSYFNMIEGQGHGAVFDCKCSPDGQHFACTDSHGHLLIFGFGSSSRYDKIADQMFFHTDYRPLIRDAHN 400 
WD40-rpts      ___)   (___________________WD 8___________________)                             

Query      401 FVLDEQTQQAPHLMPPPFLVDVDGNPHPPRFQRLVPGRENCREEQLIPQMGLTSSGLNQVVSQQAAEGSSPLDSMIQRLQ 480 
WD40-rpts                                                                                      

Query      481 QEQDQRLGSDSRANRGSVSSPTEVTSPPNVGLRRSGQIEGVRQMHSNAPRSEIATERDLVAWSRRVLVPELSLAIACKQE 560 
WD40-rpts                                                                                      

Query      561 IWRTAKGEEEINIYRSERRRRSLHSQYHRENRHAIENAAEEGRRHQGNQHNYHTRLAVEETSRQSEPNEEEHSASEGETE 640 
WD40-rpts                                                                                      

Query      641 VRPPSRESSDEEREEKEPWPDENSSSSDYSSDYSDWTADAGINLEPPKKTSVKKKKKKNASSSEEDGEKKKDSKKERRKE 720 
WD40-rpts                                                                                      

Query      721 KPDKDGALPKKKKPKEKRKRIPELQNQGLTLEEWLPSNWITDTMPRRCPFTPQMGDEVYYFRQGHEAYVEMAKKNKIFSI 800 
WD40-rpts                                                                                      

Query      801 NPKKQPWHKLELREQELLKIVGIKYEVGLPTLCCLKLAFLDPDSGKLTGGSFSIKYHDMPDVIDFLVLRQQFDNARQRNW 880 
WD40-rpts                                                                                      

Query      881 MIGDRFRAVIDDAWWFGTIESQEPYQAEYPDSLFQCYNVCWDNGDTEKMSPWDMEEVPDEVVFPEELGLSMALTQDEQKA 960 
WD40-rpts                                                                                      

Query      961 LLYKPLDGEWGSRTRNQECERIIRGINQLCTLDVAKPFELPVDLQAYPTYCTVVAYVTDLSTIRQRLENRFYRRMSSLMW 1040
WD40-rpts                                                                                      

Query     1041 EVRYIEHNAQTFNEPGAFIVRTAKFVSDLMLQFIKDQSCTDIIPLYNSMKKTAFSDSSDDEDEDEDEEHEAPCTSNRNKK 1120
WD40-rpts                                                                                      

Query     1121 RQQQQPMLRSLRSKPSSDPQAWKERCRELLELIFQCEDSEPFRQPVDLDEYPDYLDIVDTPMDFGTVLNRLLAGEYDTPM 1200
WD40-rpts                                                                                      

Query     1201 DLCKDVRLIFSNSKAYTPSKKSRIYSMSLRLSALFEEHISSILTDFKAAQSLHSERLTRQRLHTDRLTRQSVKKRRRRSS 1280
WD40-rpts                                                                                      

Query     1281 SHSSSASSPERKRRVSSRAPPRLDSAAPPTPAGPSRAPSLRQTHPQINGKAETPVVPGRTRSSARFGSPITDVAPAQSAP 1360
WD40-rpts                                                                                      

Query     1361 PPLVESSSSRVLRTQNPHSTAVSRENESSAVPPSNGGGARESRRKLRTPVKLTPGPVDHSSPPQNSLHLNGHSQVTVGMV 1440
WD40-rpts                                                                                      

Query     1441 RRGRGRPRLDTQIETPVDTPPPPLPKTSSKKKERKSKKDTESPRRNFSHEEELMLPTGDDGGASSTAQDSNLSDSGEYPK 1520
WD40-rpts                                                                                      

Query     1521 ARGRPRITKTIDTPAPPSPKTLRRSSRRGNEEITPHTSGSAQSEEPEVYIGEDGSSKGQMKTRNQGRRTAFYNEEDSEEE 1600
WD40-rpts                                                                                      

Query     1601 QRQLLFEDASITFGTSSKGRVRKLTEKAKANLIGW 1635
WD40-rpts                                         

8 WD40-repeats found in QUERY=ENSDARP00000018130 (Len=1635):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     5-39       8.10  449.37  5.5e-05       32.5%     46.46
  WD 2:  Seg  4    43-81       9.02  487.11  1.7e-05       32.5%     52.97
  WD 3:  Seg  8    82-127      7.93  442.23  6.8e-05       42.5%     53.28
  WD 4:  Seg 12   141-177      5.39  337.49  0.00176       25.0%     41.72
  WD 5:  Seg 15   178-221      9.56  509.55  8.4e-06       47.5%     52.38
  WD 6:  Seg 20   243-281      4.66  307.35  0.00448       17.5%     41.45
  WD 7:  Seg 23   285-324      7.84  438.57  7.6e-05       35.0%     54.64
  WD 8:  Seg 27   328-371      4.42  297.32  0.00611       22.5%     50.77

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    5-39     -----------KRILGHLSS-----VYCVTFDR----TGRRIFTGSDDCLVKIWA
   WD 2   43-81     -G----HL--LATLRGHAAE-----ISDMAVNY----ENTLLAAGSCDKMIRVWC
   WD 3   82-127    LQ----TCAPLAVLEGHAAS-----ITSLQFSPLCSGNKRFLSSTGADGTICFWQ
   WD 4  141-177    K---------FIERPRPGVQ-----MICSSFSA----GGMFLATGSTDHIIRVYY
   WD 5  178-221    FGGGQPEK--ISELESHTDK-----VDSIQFSH----SGDRFVSGSRDGTARIWQ
   WD 6  243-281    -N----PP--PLEDKVTKLK-----VTMVAWDC----NDNTVITAANNLTLKVWN
   WD 7  285-324    -G----NL--IHVLMGHEDE-----VFVLEPHP---FDSRVLFSAGHDGNAIVWD
   WD 8  328-371    -G----VK--IRSYFNMIEGQGHGAVFDCKCSP----DGQHFACTDSHGHLLIFG

   WD40 Template    TG----EC--LRTLSGHTSG-----VTSVSFSP----DGKRLVSGSEDGTIKVWD