Input parameters:

  Query = ENSDARP00000018434 (Len=326)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000018434, Len=326):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPDDTVRSASYTVPCEDYVHVVEFSPYDCGSPASLLAYGGNKYVVVGTCRFKEEDAEVEGVEFNSLQVFMHGVRVDAIAW 80  
WD40-rpts               (_________________WD 1________________)    (_________________________WD

Query       81 SPETHLDKLPPVIRFSTAAADRKIRLWTSDLQNSCDVKVMEGHTSYINHLVFEPAEGKQIASVSDDHTCRVWDLDGNETT 160 
WD40-rpts       2_________________________)     (_________________WD 3_________________)  (____

Query      161 SFRLRSPGVSVCWHPEDNCKLMVAEKKGTIRFYDLVTQHAILSLDSGQVPLMSADWCLTNTIKVGAVVANDWVIWDITRS 240 
WD40-rpts      _____________WD 4________________)   (_________________WD 5________________)    

Query      241 SYPLEKRPAHVDKARHFRWSRANENLFATTGYPGKINSQLLVHHLGHPQPVMLGSASVGAGLSWHRTLPLCVIGGDRKLF 320 
WD40-rpts      (_________________WD 6_________________)     (________________WD 7______________

Query      321 FWMTEM 326 
WD40-rpts      __)   

7 WD40-repeats found in QUERY=ENSDARP00000018434 (Len=326):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    10-48       3.80  271.82  0.01344       20.0%     46.77
  WD 2:  Seg  4    53-108      6.11  367.00  0.00070       20.0%     49.69
  WD 3:  Seg  8   114-153      9.10  490.70  1.5e-05       37.5%     52.64
  WD 4:  Seg 12   156-194      8.94  483.79  1.9e-05       22.5%     55.07
  WD 5:  Seg 16   198-236      8.30  457.58  4.2e-05       12.5%     57.91
  WD 6:  Seg 20   241-280      5.83  355.41  0.00101       15.0%     52.34
  WD 7:  Seg 24   286-323      6.90  399.63  0.00026       17.5%     48.36

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   10-48     -------------SYTVPCEDYVHVVEFSPYDCGSPAS--------LL-AYGGNK-YVVVGT
   WD 2   53-108    EEDAEVEGVEFNSLQVFMHGVRVDAIAWSP-----ETHLDKLPPVIRF-STAAADRKIRLWT
   WD 3  114-153    -SCD--------VKVMEGHTSYINHLVFEP----AEGK--------QI-ASVSDDHTCRVWD
   WD 4  156-194    -GNE--------TTSFRLRSPGVSVCWHPE-----DNC--------KL-MVAEKKGTIRFYD
   WD 5  198-236    -QHA--------ILSLDSGQVPLMSADWCL-----TNT--------IK-VGAVVANDWVIWD
   WD 6  241-280    -SYP--------LEKRPAHVDKARHFRWSR-----ANE--------NLFATTGYPGKINSQL
   WD 7  286-323    -GHP--------QPVMLGSASVGAGLSWHR-----TLP---------L-CVIGGDRKLFFWM

   WD40 Template    TGEC--------LRTLSGHTSGVTSVSFSP-----DGK--------RL-VSGSEDGTIKVWD