Input parameters:

  Query = ENSDARP00000018443 (Len=340)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000018443, Len=340):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSELDQLRQEAEQLKNQIRDARKACADATLSQITANIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLI 80  
WD40-rpts                                                  (_________________WD 1______________

Query       81 IWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS 160 
WD40-rpts      __)   (_________________WD 2________________)       (________________WD 3_______

Query      161 SGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNA 240 
WD40-rpts      _________)   (_________________WD 4________________)   (_________________WD 5___

Query      241 FATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGV 320 
WD40-rpts      _____________)(___________________WD 6___________________)   (_________________W

Query      321 TDDGMAVATGSWDSFLKIWN 340 
WD40-rpts      D 7________________)

7 WD40-repeats found in QUERY=ENSDARP00000018443 (Len=340):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    45-83       9.35  500.92  1.1e-05       35.0%     49.05
  WD 2:  Seg  5    87-125      8.78  477.34  2.3e-05       15.0%     56.65
  WD 3:  Seg  9   133-170      7.64  430.42  9.8e-05       32.5%     50.08
  WD 4:  Seg 13   174-212     10.43  545.70  2.7e-06       42.5%     55.73
  WD 5:  Seg 17   216-254     10.44  546.11  2.7e-06       35.0%     53.61
  WD 6:  Seg 21   255-298      8.51  466.00  3.3e-05       32.5%     55.29
  WD 7:  Seg 25   302-340      9.88  522.60  5.6e-06       27.5%     49.38

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   45-83     -MR----TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD
   WD 2   87-125    -TN----KVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYS
   WD 3  133-170    -VR----VSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWD
   WD 4  174-212    -GQ----QTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWD
   WD 5  216-254    -GM----CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD
   WD 6  255-298    LRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWD
   WD 7  302-340    -AD----RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN

   WD40 Template    TGE----CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD