Input parameters:

  Query = ENSDARP00000018714 (Len=386)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000018714, Len=386):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MATPTEHEDLSEQEVTEDEFKTPKIRETPEDIKLEAIVNTIAFHPKQDILAAGDIDGDIYLFSYSCTEGENKELWSSGHH 80  
WD40-rpts                              (_________________WD 1________________)       (_________

Query       81 LKSCRKVLFSSDGQKLFSVSKDKAIHIMDVEAGKLETRIPKAHKAPINAMLLIDENIFATGDDEGTLKVWDMRKGTSFMD 160 
WD40-rpts      ________WD 2________________)   (_________________WD 3________________)   (_____

Query      161 LKHHEDYISDITIDQAKRTLLTSSGDGTLGVFNIKRRRFELLSEIQNGDLTSVSIMKRGRKVVCGSGEGTIYIFNWNGFG 240 
WD40-rpts      ____________WD 4________________)   (_________________WD 5________________)    (

Query      241 ATSDRFAVQAESVDCIVPITDSILCAASTDGVIRAINILPNRVVGSIGQHVGEAIEEIARCRDTHFLASCAHDELIKFWD 320 
WD40-rpts      ________________WD 6________________)   (_________________WD 7_________________)

Query      321 ISSLPDEKVNDYRRRKKKDRRLKALSNKAFDTGQNFFAGLLDTTEENGKEGEDDDDDDEDSDSGSD 386 
WD40-rpts                                                                        

7 WD40-repeats found in QUERY=ENSDARP00000018714 (Len=386):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    25-63       7.75  434.84  8.6e-05       20.0%     45.46
  WD 2:  Seg  6    71-109      9.08  489.85  1.6e-05       32.5%     56.07
  WD 3:  Seg 10   113-151      9.11  490.86  1.5e-05       22.5%     51.39
  WD 4:  Seg 14   155-193      9.26  497.24  1.2e-05       22.5%     56.63
  WD 5:  Seg 18   197-235      9.19  494.21  1.4e-05       27.5%     56.57
  WD 6:  Seg 22   240-277      7.01  404.21  0.00022       20.0%     51.28
  WD 7:  Seg 26   281-320      7.99  444.88  6.3e-05       22.5%     55.89

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   25-63     IRETPEDIKLEA-IVNTIAFHPKQDILAAGDIDGDIYLFS
   WD 2   71-109    NKELWSSGHHLK-SCRKVLFSSDGQKLFSVSKDKAIHIMD
   WD 3  113-151    GKLETRIPKAHK-APINAMLLIDENIFATGDDEGTLKVWD
   WD 4  155-193    GTSFMDLKHHED-YISDITIDQAKRTLLTSSGDGTLGVFN
   WD 5  197-235    RRFELLSEIQNG-DLTSVSIMKRGRKVVCGSGEGTIYIFN
   WD 6  240-277    GATSDRFAVQAE-SVDCIVPITDS-ILCAASTDGVIRAIN
   WD 7  281-320    NRVVGSIGQHVGEAIEEIARCRDTHFLASCAHDELIKFWD

   WD40 Template    GECLRTLSGHTS-GVTSVSFSPDGKRLVSGSEDGTIKVWD