Input parameters:

  Query = ENSDARP00000019416 (Len=326)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000019416, Len=326):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNVNQGTVGSDPVILATAGYDHTVRFWQAHSGICTRTVQHQDSQVNSLEVTPDRSMIAAAGYQHIRMYDLNSNNPNPVIN 80  
WD40-rpts      (___________WD 1___________)   (________________WD 2________________)(__________

Query       81 YDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDLRSRNLQCQRIFQVNAPINCVCLHPNQAELIVGDQSGVIHIWDLKTD 160 
WD40-rpts      _________WD 3___________________)(___________________WD 4__________________)   (

Query      161 HNEQLIPEPDVSVNSVHIDPDASYMAAVNSSGNCYVWNLAGGMGDEVTQLIPKTKIPAHKRYSLRCKFSPDSTLLATCSA 240 
WD40-rpts      _________________WD 5________________)        (__________________WD 6___________

Query      241 DQTCKIWRTSNFSLMTELSIKSNNPGETSRGWMWDCAFSGDSQYIVTASSDNLARLWCVETGEIKREYSGHQKAVVCLAF 320 
WD40-rpts      _______)          (_________________WD 7_________________)                      

Query      321 NDSVLG 326 
WD40-rpts            

7 WD40-repeats found in QUERY=ENSDARP00000019416 (Len=326):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-28       5.05  323.08  0.00275       15.0%     44.87
  WD 2:  Seg  4    32-69       7.96  443.54  6.5e-05       27.5%     56.09
  WD 3:  Seg  8    70-113      9.18  494.00  1.4e-05       30.0%     56.21
  WD 4:  Seg 12   114-156      8.71  474.56  2.5e-05       20.0%     56.62
  WD 5:  Seg 16   160-198      8.92  482.96  1.9e-05       20.0%     52.83
  WD 6:  Seg 20   207-248      9.09  490.35  1.5e-05       27.5%     45.51
  WD 7:  Seg 24   259-298      9.38  502.04  1.1e-05       17.5%     37.97

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-28     ---------------------MNVNQGTVGSDPVILATAGYDHTVRFWQ
   WD 2   32-69     -G----I---C--TRTVQHQDSQVNSLEVTPDRSMIAAAG-YQHIRMYD
   WD 3   70-113    LNSNNPN---P--VINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWD
   WD 4  114-156    LR----SRNLQ--CQRIFQVNAPINCVCLHPNQAELIVGDQSGVIHIWD
   WD 5  160-198    -D----H---N--EQLIPEPDVSVNSVHIDPDASYMAAVNSSGNCYVWN
   WD 6  207-248    VT----Q---LIPKTKIPAHKRYSLRCKFSPDSTLLATCSADQTCKIWR
   WD 7  259-298    SI----K---S--NNPGETSRGWMWDCAFSGDSQYIVTASSDNLARLWC

   WD40 Template    TG----E---C--LRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD