Input parameters:

  Query = ENSDARP00000021430 (Len=604)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000021430, Len=604):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEIVYVYTKKRSEFGRQCNFSDRPAELHVDILPDSSLAANFTVRDPCNVTIQCADEMSEHEVNTERFESESRGINHVEGG 80  
WD40-rpts                                                                                      

Query       81 WPKDLNPDDMEATIRYRKKVEKDEHYQNTIMQIAGLMEHCIRQNNATDIYEDFLEDEDEEDVEESEEQPSAKTINVFRDP 160 
WD40-rpts                                                                                      

Query      161 NEVKRTATSLSWHPDGNHKLAVAYSSLEFQRAPNDMNFDSYIWDIENPNKPEMTLKPVCPLVCLEYNPKDSHILIGGSYN 240 
WD40-rpts                                                     (_________________WD 1___________

Query      241 GQIAYWDTRKGSQPVEMSPIEFSHRDPVYKAIWLQSKTGTDIFSASTDGQVLWWDIRKMSEPTERLVMDPTKKGNIDNSL 320 
WD40-rpts      ______)       (__________________WD 2_________________)                         

Query      321 GAISLEFETTMPTKFMVGTEQGLVVSCNRKAKTPAEKIVCTYSGHHGPVYALQRNPFFPKNFLTVGDWTARIWSEDIKES 400 
WD40-rpts                                             (_______________WD 3______________)(_____

Query      401 SIMWTKYHIAHLLDGCWSPVRPSVFFTVKMDGTLDVWDILFKQNDPTLCLKVCDEALYSIKVQDNGRFLACGSQLGTTTL 480 
WD40-rpts      ______________WD 4___________________)     (_________________WD 5_______________

Query      481 LEISSGLCSLQKNEKALVSEMFERETKREKILEARHREMRLKERSRSEQSREDEMKETDGEESVEELVARAEKEFFHIIE 560 
WD40-rpts      _)                                                                              

Query      561 NERMKERNEEKDKDQEKGVCEEKDFQEEHETNGVSSFVRTEISL 604 
WD40-rpts                                                  

5 WD40-repeats found in QUERY=ENSDARP00000021430 (Len=604):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 10   208-247      4.23  289.46  0.00780       22.5%     49.15
  WD 2:  Seg 14   255-295      4.97  320.10  0.00302       27.5%     41.97
  WD 3:  Seg 21   360-394      5.03  322.45  0.00281       22.5%     42.30
  WD 4:  Seg 24   395-438      4.16  286.46  0.00856       22.5%     51.84
  WD 5:  Seg 28   444-482      4.52  301.46  0.00538       20.0%     54.79

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  208-247    -P---NKPEMTLKPVCPLVCLEY--NPKDSHIL-IGGSYNGQIAYWD
   WD 2  255-295    -V---EMSPIEFSHRDPVYKAIWLQSK-TGTDI-FSASTDGQVLWWD
   WD 3  360-394    --------CTYSGHHGPVYALQR--NP-FFPKN-FLTVGDWTARIWS
   WD 4  395-438    EDIKESSIMWTKYHIAHLLDGCW--SP-VRPSVFFTVKMDGTLDVWD
   WD 5  444-482    -N---DPTLCLKVCDEALYSIKV--QD-NGRFL-ACGSQLGTTTLLE

   WD40 Template    TG---ECLRTLSGHTSGVTSVSF--SP-DGKRL-VSGSEDGTIKVWD