Input parameters:

  Query = ENSDARP00000022305 (Len=1026)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000022305, Len=1026):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSTFLRAVRNNIPEKDKSELTENDLKKWGLGAIHLRPYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQTISLLAYARGS 80  
WD40-rpts                                                                                      

Query       81 LKMNGPFLVLCPLAVLENWRQELERFCPSLSVICYTGDKERRAELQQNLKSDPRFHVLLTTYEMCLKDARYLKSWKWKIL 160 
WD40-rpts                                                                                      

Query      161 VVDEAHRLKNQESLLHQTLKEFTVGFRVLLTGTPIQNNLQEVYSLLTFIQPSVFLPEAVEDFVNAYADIQTEPALVDELH 240 
WD40-rpts                                                                                      

Query      241 QVLQPFLLRRVKAEVAAELPKKTELVVFHGLSALQKRYYKAILMRDLDAFRTDQSTKTRLLNVLMQLRKCVDHPYLFDGV 320 
WD40-rpts                                                                                      

Query      321 EPEPFEMGEHLVEASGKLSLLDSMLAYLQEGGHHVLLFSQMTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFST 400 
WD40-rpts                                                            (_________________________

Query      401 KDVFIFLLSTKAGGVGMNLTAADTVIFVDGDFNPQNDLQAAARAHRIGQTRPVKVIRLLGRDTIEEIIYSRAVSKLRLTD 480 
WD40-rpts      WD 1_________________________)                                                  

Query      481 TVIEEGRFSLLDQAQSAASGLQLSEILKFGVDKLLSSEESSVQDVDLQLILGQSRDGQWLTDEEHAKLNESNEEEDEDME 560 
WD40-rpts                                                                                      

Query      561 GQNHMYYFEGKDYSKDPSAEDEKTFELLLEKQFAEMEDAEKEGRALRNKAGVSLSGPLINPARKKRPLTESELEERRQKR 640 
WD40-rpts                                                                                      

Query      641 QAAAAKRAKLQEERKKQQEELNYKKKMAWWDSCGYRSLCLPRVDSEGEDMEPDEDDHVSFSSTDSDHTAIRYVLGDVTHP 720 
WD40-rpts                                                                                      

Query      721 QADREDAIIVHCVDDSGHWGRGGLFTALELRSDEPRKQYELAGDMKDLELGNVLLFPVDDKQSRLCGRDYLALIVAQQRD 800 
WD40-rpts                                                                                      

Query      801 KANKLSGIRLTALDEGLKKIYRAAKQKKASVHLPRIGHSTKGFNWYGTERLIRKHLATRGIFTSIYYYRRGSSHTTVSST 880 
WD40-rpts                                                                                      

Query      881 ASTTTPSSSKPAASSPSESPHSSSPPANREGLTKSAELSTTSHEGPGAPGLADFMRGVHVYFYNMAATEKKKLTRYLITY 960 
WD40-rpts                                                                                      

Query      961 DGDEEDLMSSHVTHIVGEVESPVHKQELQDLLHQYPQALLVKKNWLEFCFASQRKVSVSKYVIRLT 1026
WD40-rpts                                                                        

1 WD40-repeats found in QUERY=ENSDARP00000022305 (Len=1026):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  8   375-430      2.98  237.67  0.03833       20.0%     23.99

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  375-430    RGYSYERLDGSVRGEERNLAIKNFSTKDVFIFLLSTKAGGVGMNLTAADTVIFVDG

   WD40 Template    TGECLRTLSGHTS----------------GVTSVSFSPDGKRLVSGSEDGTIKVWD