Input parameters:

  Query = ENSDARP00000024810 (Len=1045)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000024810, Len=1045):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MMKFRFRRQGNDPHREKIKQDLFAFNKTVEHGFPNQPSALAYDPKLQLMAIGTKSGAIKIYGAPGVEMTGLHKDTAAVTQ 80  
WD40-rpts      (____________________________WD 1____________________________)  (_______________

Query       81 IHFLCGQGRILSLLDDNTIHLWEIVQRENRSHLLEVHSFNLPGRPGIESTSATRVTVMLLNLSCNLLALGTEGGGVHFLE 160 
WD40-rpts      __WD 2________________)_______________WD 3________________)                     

Query      161 LPTLTLLNKSLFQDEIMQSVPEEYKCGKSLGPVESLQEHPKDSDKILIGYSRGLVVLWDLSSRHVDNLFLGKQQLESLVW 240 
WD40-rpts                 (_____________________WD 4_____________________)  (_________________W

Query      241 ERSGNSFVSSHSDGGYMVWAVSSSNPCTHDPVSSTIPYGPFPCKAVNKILWRTTESGAPLVLFSGGMPRASYGDRHCLTI 320 
WD40-rpts      D 5________________)                                                            

Query      321 LQDSSHVTLDFTSRVIDFFTIHCTDTEKDFDEPSALVVLLEEELVVIDLQMPGWPTVPAPYLAPLHSSAITCSCHISNVP 400 
WD40-rpts                                                                                      

Query      401 PKLWERVISAGQQQCPLQNYENWPICGGKNLAPDPKQKELLLTGCHEDGTVRFWDASGVSLKPLYKLSTASIFQTDCEHN 480 
WD40-rpts                 (___________________WD 6___________________)                         

Query      481 DSLTQAGEEEWPPFRKVGCFDPYSDDPRLGIQKISLCKYSGKLVVAGTAGQVIVMVLGDEKSDHMIDVATVDLLQDREGF 560 
WD40-rpts                       (_________________WD 7________________)                        

Query      561 TWKGHDRLPPKSGSVVFAPGFQPVVLVQCLPPAAVTAVTLHAEWNLIAFGTSHGFGLFDYHRRSPVLARCTLHPNDSLAM 640 
WD40-rpts                                                                                      

Query      641 EGPLSRVKSLKKSLRQSFRRIRKSRVSGKKRVVVNSPTSKVQEANAHLADHDAEVTPVQRRIEPRSADDSLSGVVRCLCF 720 
WD40-rpts                                                                                      

Query      721 ADTFLRDGTHHGPTMWAGTNSGSVYAYALDVPSQEKFSEQSVEALLGKEIQLMHRAPVVSIAVLDGRGNPLPEPYEVSRD 800 
WD40-rpts                                                                                      

Query      801 LAKAPDMQGSHSVLIASEEQFKVFMLPKVSAKTKFKLTAHEGCRVRKVALANFTSVSSEDYSENALVCLTNMGDIHMFSV 880 
WD40-rpts                                                                                      

Query      881 PALRPQVRYDCVRKEDISGIASCVFTKTGQGFYLISPSEYERFSLSARVITEPLCGVDVERPHDVSAHSSSSTTLPPQAN 960 
WD40-rpts                                                                                      

Query      961 GTHNLLSMDCNTVSSSKINQSQEMRSVLSSPILDSPNSSADITLDTTGDLTVEDVKDFLMTVDEAENNFRNITEEDGRSA 1040
WD40-rpts                                                                                      

Query     1041 GILIN 1045
WD40-rpts           

7 WD40-repeats found in QUERY=ENSDARP00000024810 (Len=1045):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-62       5.49  341.29  0.00156       15.0%     48.56
  WD 2:  Seg  5    65-103      6.53  384.55  0.00041       30.0%     58.81
  WD 3:  Seg  8   101-139      3.35  253.21  0.02384       10.0%     20.22
  WD 4:  Seg 14   172-219      4.52  301.50  0.00537       20.0%     42.28
  WD 5:  Seg 17   222-260      5.36  336.21  0.00183       22.5%     55.10
  WD 6:  Seg 29   412-455      4.10  283.86  0.00927       25.0%     12.91
  WD 7:  Seg 33   498-536      3.68  266.68  0.01575       17.5%     37.01

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-62     MMKFR-------FRRQGN---DPHREKIKQDLFAFNKTVEHGFPNQPSALAYDP-KLQLMAIGT-KSGAIKIYG
   WD 2   65-103    -GVEM-------TGLHKD---T----------------------AAVTQIHFLC-GQGRILSLL-DDNTIHLWE
   WD 3  101-139    -LWEI-------VQRENR---S----------------------HLLEVHSFNL-PGRPGIEST-SATRVTVML
   WD 4  172-219    FQDEIMQSVPEEYKCGKS---L----------------------GPVESLQEHPKDSDKILIGY-SRGLVVLWD
   WD 5  222-260    -SRHV-------DNLFLG---K----------------------QQLESLVWER-SGNSFVSSH-SDGGYMVWA
   WD 6  412-455    QQQCP-------LQNYENWPIC----------------------GGKNLAPDPK-QKELLLTGCHEDGTVRFWD
   WD 7  498-536    -GCFD-------PYSDDP---R----------------------LGIQKISLCK-YSGKLVVAG-TAGQVIVMV

   WD40 Template    TGECL-------RTLSGH---T----------------------SGVTSVSFSP-DGKRLVSGS-EDGTIKVWD