Input parameters:

  Query = ENSDARP00000025096 (Len=448)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000025096, Len=448):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYVVHRLVLGTHTSDEQNHLVI 80  
WD40-rpts                                                                             (________

Query       81 ASVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSK 160 
WD40-rpts      _________WD 1________________)          (______________WD 2_____________)       

Query      161 PDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE 240 
WD40-rpts            (_________________WD 3_________________)             (________________WD 4

Query      241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEI 320 
WD40-rpts      _______________)      (_________________WD 5_________________)(_________________

Query      321 FQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400 
WD40-rpts      __WD 6___________________)(__________________________WD 7_______________________

Query      401 VWQMAENIYNDEEPDTPASELGTGVITDLILNIQPLLTLHILLFSIIP 448 
WD40-rpts      __)                                             

7 WD40-repeats found in QUERY=ENSDARP00000025096 (Len=448):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    72-110      3.78  270.70  0.01392        7.5%     -22.91
  WD 2:  Seg  5   121-153      3.87  274.57  0.01235       12.5%     44.35
  WD 3:  Seg  8   167-206      6.23  371.84  0.00061       32.5%     51.71
  WD 4:  Seg 13   220-256      6.36  377.32  0.00051       27.5%     47.00
  WD 5:  Seg 16   263-302      7.51  424.76  0.00012       32.5%     53.80
  WD 6:  Seg 20   303-346      6.97  402.55  0.00023       27.5%     51.97
  WD 7:  Seg 24   347-403      5.91  358.96  0.00090       32.5%     53.90

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   72-110    -S----------------DE---QNHLVIASVQIPNDDAQFDAS-H-Y-DSEKGAEFGGFGS
   WD 2  121-153    ---------------------------INHEGEVNRARYMPQNPCI-I-ATKTPTSDVLVFD
   WD 3  167-206    -C----------------SP---DLRLRGHQKEGYGLSWNPNLSGN-L-LSASDDHTICLWD
   WD 4  220-256    -----------------------KTIFTGHTAVVEDVSWHLLHE-S-LFGSVADDQKLMIWD
   WD 5  263-302    -S----------------KP---SHSVDAHTAEVNCLSFNPYSEFI-L-ATGSADKTVALWD
   WD 6  303-346    LR----------------NLKLKLHSFESHKDEIFQVQWSPHNE-TIL-ASSGTDRRLNVWD
   WD 7  347-403    LSKIGEEQSAEDAEDGPPEL---LFIHGGHTAKISDFSWNPNEPWV-I-CSVSEDNIMQVWQ

   WD40 Template    TG----------------EC---LRTLSGHTSGVTSVSFSPDGK-R-L-VSGSEDGTIKVWD