Input parameters:

  Query = ENSDARP00000025541 (Len=161)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000025541, Len=161):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNDIYKAAAEQLTDEQKNEFRAAFDIFVQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFEEFLVM 80  
WD40-rpts      (____________________________________________________________________WD 1_______

Query       81 MVRCMKDDSKGRPEEELAELFRMFDKNADGYIDLDELKLMLEATGEAITEDDIEELMRDGDKNNDGKIDYDEFLEFMKGV 160 
WD40-rpts      ____________________________________________________________)                   

Query      161 E 161 
WD40-rpts       

1 WD40-repeats found in QUERY=ENSDARP00000025541 (Len=161):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-141      2.98  237.89  0.03807       22.5%     -8.10

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-141    MNDIYKAAAEQLTDEQKNEFRAAFDIFVQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFEEFLVMMVRCMKDDSKGRPEEELAELFRMFDKNADGYIDLDELKLMLEATGEAITEDDIEELMRDGD

   WD40 Template    TG-------ECLR--------------TLSGHTSGVT-----------SVSFS------------PDGKRLVS------------------GS--------------EDGTIK--------------VW-----------D