Input parameters:

  Query = ENSDARP00000026057 (Len=490)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000026057, Len=490):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MASVMEDPTLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSSR 80  
WD40-rpts            (_________________WD 1_________________)   (_________________WD 2_________

Query       81 DQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIA 160 
WD40-rpts      _______)   (_________________WD 3________________)   (_________________WD 4_____

Query      161 SCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSG 240 
WD40-rpts      ___________)   (_________________WD 5________________)   (_________________WD 6_

Query      241 NYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKTNFDSLNYRELLSKHSKRVTPD 320 
WD40-rpts      _______________)   (_________________WD 7________________)                      

Query      321 PPPHLMDIYPRSHHRHHPQNGTVEINPVADTQSTDPQVVEVGRVVFSTTDARNYDGASSSRAQFTSGMDSGPFRTHTQAR 400 
WD40-rpts                                 (_________________WD 8________________)              

Query      401 EEEDENQEERFAGGMTASPAERSGIPSSLTSTLENIVQQLDILTQTVAVLEERLTLTEDKLRTCLDNQVLLMQQNQQLDR 480 
WD40-rpts                                                                                      

Query      481 SDEESEGPPL 490 
WD40-rpts                

8 WD40-repeats found in QUERY=ENSDARP00000026057 (Len=490):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     7-46       9.64  512.99  7.6e-06       27.5%     53.51
  WD 2:  Seg  5    50-88       9.87  522.43  5.7e-06       32.5%     54.19
  WD 3:  Seg  9    92-130     10.20  536.15  3.7e-06       42.5%     55.18
  WD 4:  Seg 13   134-172     10.32  540.92  3.2e-06       37.5%     57.30
  WD 5:  Seg 17   176-214     10.01  528.14  4.7e-06       30.0%     52.91
  WD 6:  Seg 21   218-256     10.25  538.15  3.5e-06       40.0%     57.07
  WD 7:  Seg 25   260-298     10.08  530.95  4.3e-06       37.5%     54.61
  WD 8:  Seg 34   348-386      5.55  343.95  0.00144       15.0%     26.67

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    7-46     DPTLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWN
   WD 2   50-88     -KARAFRFVGHTDVITGVNFAPSGSLVASSSRDQTVRLWT
   WD 3   92-130    -KGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWG
   WD 4  134-172    -KKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWD
   WD 5  176-214    -HQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWD
   WD 6  218-256    -NKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILD
   WD 7  260-298    -GRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWK
   WD 8  348-386    VAD-TQSTDPQVVEVGRVVFSTTDARNYDGASSSRAQFTS

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD