Input parameters:

  Query = ENSDARP00000028831 (Len=496)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000028831, Len=496):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDLWYLYEWIDIKSILIFLCVFLLLGDYIKNKAPKNFPPGPWSLPIIGDLHHIDNSKIHLQFTKFAERYGNIFSLRLFGP 80  
WD40-rpts                                                                                   (__

Query       81 RIVVLNGYNLVKEVYIKQGDNLADRPVLPLFYEIIGDKGIVLSSGYKWKHQRRFALSTLRNFGLGKKSLEPSINLECGFL 160 
WD40-rpts      ________________________________________________________________________________

Query      161 NEAISNEQGRPFDPRLLLNNAVSNVICVLVFGNRFDYSDHHFQTLLKHINEAIYLEGGICAQLYNMFPWLMQRLPGSHKK 240 
WD40-rpts      _________WD 1___________________________________________________________________

Query      241 VITLWKKVIDFIRQKVNEHKVDHDPLNPRDYIDCFLAEMEKLKDDTAAGFDVENLCICTLDLFVAGTETTSTTLYWGLLY 320 
WD40-rpts      _______________________)                                                        

Query      321 MMKYPVIQAKVQEEIDRVVGGSRHPSVSDRDNMPYTNAVIHEIQRMGNIIPINVTRTTSEDIRIGKYSVPKGTMVTSNLT 400 
WD40-rpts                                                                                      

Query      401 SVLFDESEWETPHSFNPGHFLNAEGKFRRRDAFLPFSLGKRVCLGEQLARMELFLFFSSLLQRFTFSPPAGVEPSLDYKL 480 
WD40-rpts                                                                                      

Query      481 GATHCPQPYKLCAVPR 496 
WD40-rpts                      

1 WD40-repeats found in QUERY=ENSDARP00000028831 (Len=496):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    78-264      2.90  234.48  0.04224       30.0%     -6.51

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   78-264    FGPRIVVLNGYNLVKEVYIKQGDNLADRPVLPLFYEIIGDKGIVLSSGYKWKHQRRFALSTLRNFGLGKKSLEPSINLECGFLNEAISNEQGRPFDPRLLLNNAVSNVICVLVFGNRFDYSDHHFQTLLKHINEAIYLEGGICAQLYNMFPWLMQRLPGSHKKVITLWKKVIDFIRQKVNEHKVDHD

   WD40 Template    TGECLRTLSG----------HTSGVTSVSFSP--------DGKRLVSG----------------------S-------------------------------------------------ED-----------------GT---------------IKVW--------------------------D