Input parameters:

  Query = ENSDARP00000029912 (Len=372)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000029912, Len=372):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 SQTCQTRWCVFEIMSFALDRFCQNLCSIIISQEPTSRKLCVIMLRHSRGVVFYPRVLRDVSSVDLSTTVLGQRVSLPICV 80  
WD40-rpts                                                                                      

Query       81 SATAMQRMAHPDGETATARACLSSGTGMMLSSWSTSSIEEVCEAAPGAVRWLQLYIYKDRTLTQSLVRRAEDAGYKGIFV 160 
WD40-rpts                                                                                      

Query      161 TVDTPYLGRRRDDVRNRFKLPSHLRMANFESPDLAFSKKEGYGEDSGLAVYVTQAIDATVRWQDIGWLKTLTKLPVVVKG 240 
WD40-rpts                                                                            (_________

Query      241 VLTAEDAKEALKYGVDGILVSNHGARQLDGVPATIDALPEVVAAVAGQVEVFMDGGVRMGSDVLKALALGAKAVFIGRPV 320 
WD40-rpts      ____________________________WD 1_____________________________________)          

Query      321 LWALACQGEKGVSDVLEILREELHLALALAGCRSLKEVNRSLLRRPELISRI 372 
WD40-rpts                                                          

1 WD40-repeats found in QUERY=ENSDARP00000029912 (Len=372):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   231-310      3.66  265.86  0.01616       22.5%      8.19

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  231-310    LTKLPVVVKGVLTAEDAKEALKYGVDGILVSNHGARQLDGVPATIDALPEVVAAVAGQVEVFMDGGVRMGSDVLKALALG

   WD40 Template    TGECLRTLSGHTS----------GVTSVSFSPDGKRLVSGSE---------------------DGTIKVW---------D