Input parameters:

  Query = ENSDARP00000032005 (Len=455)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000032005, Len=455):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 TYSVNLSSDAGHGDGQSRWCLSQVKGAVDDDVAEAADIISAVEFNHSGELLATGDRGGRIVIFQQEQENKSLPQCRAEYN 80  
WD40-rpts                              (_________________WD 1_________________)                

Query       81 VYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAHFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRHPSSLTTL 160 
WD40-rpts             (___________________WD 2___________________)                             

Query      161 RVPVFQPMDLMVEASPRRVYANAHTYHINSISVNSDNETYLSADDLRVNLWHLDYTDRSFNIVDIKPANMEELTEVITAS 240 
WD40-rpts                   (_________________WD 3________________)            (_______________

Query      241 EFHPLQCNTFVYGSSKGSVRLCDMRASALCDQHSKLFEEPEDPSTRSFFSEIISSISDVKFSHSGRYMMTRDYLTLKIWD 320 
WD40-rpts      __WD 4________________)                   (________________WD 5________________)

Query      321 LHMESHPVETYQVHGYLRSKLCSLYENDCIFDKFECCWRGDDSEVMTGSYNNFFRMFEREGQRDVTLEASWENGSPGCPL 400 
WD40-rpts                    (___________________WD 6___________________)(_________________WD 7

Query      401 KSWRVSTGSRRKRNEIGVDCLDFSRKILYTSWHPQENIVALATVNNLYLFQEKLN 455 
WD40-rpts      _________________)                                     

7 WD40-repeats found in QUERY=ENSDARP00000032005 (Len=455):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    25-64       9.36  501.11  1.1e-05       20.0%     40.94
  WD 2:  Seg  6    88-131      4.38  295.72  0.00642       17.5%     45.21
  WD 3:  Seg 10   174-212      7.40  420.48  0.00013       20.0%     49.84
  WD 4:  Seg 15   225-263      6.11  367.18  0.00070       22.5%     36.59
  WD 5:  Seg 19   283-320      6.57  386.24  0.00039       25.0%     41.26
  WD 6:  Seg 23   335-378      5.31  334.12  0.00195       10.0%     44.31
  WD 7:  Seg 26   379-418      4.92  317.87  0.00323       10.0%      4.32

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   25-64     KGAVDDDVAE--AAD----IISAVEFNH--SGELLATGDRGGRIVIFQ
   WD 2   88-131    HEPEFDYLKSLEIEE----KINKIRWLPQKNAAHFLLSTNDKTIKLWK
   WD 3  174-212    ASPRRVYANA--HTY----HINSISVNS--DNETYLS-ADDLRVNLWH
   WD 4  225-263    IKP--ANMEE--LTE----VITASEFHP-LQCNTFVYGSSKGSVRLCD
   WD 5  283-320    -PSTRSFFSE--IIS----SISDVKFSH--SGRYMMTRD-YLTLKIWD
   WD 6  335-378    GYLRSKLCSL--YENDCIFDKFECCWRG--DDSEVMTGSYNNFFRMFE
   WD 7  379-418    REGQRDVTLE--ASW----ENGSPGCPL--KSWRVSTGSRRKRNEIGV

   WD40 Template    TGECLRTLSG--HTS----GVTSVSFSP--DGKRLVSGSEDGTIKVWD