Input parameters:

  Query = ENSDARP00000032408 (Len=376)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000032408, Len=376):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDISSDESDDWFMESLNAYRDLHLFQLEHPTKVIEWMGDKSICVAGYTGARSEILELLLPLKLYAGDNQGLCAERDFKVK 80  
WD40-rpts                                                                              (_______

Query       81 HGGFSEEPVECLIHIPGTRCLVTSGNSNTLQIWDIGGDDSDVIKMTRVINLKSPSAKGSKITPGFTDSPTVLHGSCISDI 160 
WD40-rpts      ___________WD 1__________________)(______________________WD 2___________________

Query      161 QLTEIATGRVLHTVGKESSDSVSGLQFVNAFVFLICSTNGALLLGDTRDPSTCHYPLEESNSGLRWSFGLRSDSSQSEPS 240 
WD40-rpts      ___)   (_________________WD 3________________)   (_____________________WD 4_____

Query      241 CCKVARLSSSGHMLLSDLRDLKSPFCQTQIKVPQSASKNHFMNISWAPVLDKCLSVSGFDGTVHIYNTNNWSTESSSPQP 320 
WD40-rpts      ________________)            (________________WD 5________________)(____________

Query      321 IFSHRGHEMSQEAKSSTFPAVVTAHSWHPSRPKTLLSAATDGSLHVWDWVDKITDR 376 
WD40-rpts      ________________WD 6___________________________)        

6 WD40-repeats found in QUERY=ENSDARP00000032408 (Len=376):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    73-114      5.60  345.94  0.00135       20.0%     44.98
  WD 2:  Seg  8   115-164      3.69  267.03  0.01558       17.5%     19.61
  WD 3:  Seg 11   168-206      3.85  273.74  0.01267       20.0%     52.37
  WD 4:  Seg 15   210-257      4.14  285.77  0.00874       15.0%     38.00
  WD 5:  Seg 19   270-307      5.69  349.50  0.00121       20.0%     45.56
  WD 6:  Seg 22   308-368      4.08  283.21  0.00946       37.5%     53.87

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   73-114    AE----------RDFKVKHGGFSE-----------EPVECLIHI---------P-GT-RCLVTSGNSNTLQIWD
   WD 2  115-164    IGGDDSDVIKMTRVINLKSP--SA-----------KGSKITPGF---------T-DS-PTVLHGSCISDIQLTE
   WD 3  168-206    -G----------RVLHTVGK--ES-----------SDSVSGLQF---------V-NA-FVFLICSTNGALLLGD
   WD 4  210-257    -P----------STCHYPLE--ES-----------NSGLRWSFGLRSDSSQSEP-SC-CKVARLSSSGHMLLSD
   WD 5  270-307    -------------IKVPQSA--SK-----------NHFMNISWA---------P-VLDKCLSVSGFDGTVHIYN
   WD 6  308-368    TN-NWSTESSSPQPIFSHRG--HEMSQEAKSSTFPAVVTAHSWH---------PSRP-KTLLSAATDGSLHVWD

   WD40 Template    TG----------ECLRTLSG--HT-----------SGVTSVSFS---------P-DG-KRLVSGSEDGTIKVWD