Input parameters:

  Query = ENSDARP00000032730 (Len=1079)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000032730, Len=1079):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MASLLRVVASSCSSPLFSGLQCARTVKKPCVRFFRTHQALNRLTSPGIPYKQLTVGVPKEIFQNERRVAISPAGVEALIK 80  
WD40-rpts                                                                                      

Query       81 QGFNVVVESGAGESAKFSDDMYTKAGATIRDVKDVFSSDVLLKVRAPMLNPTLGVHEASLMSEGATLVSFIYPAQNPELM 160 
WD40-rpts                                                                                      

Query      161 DTLSQRKATVLAMDQVPRVTIAQGYDALSSMANIAGYKAVVLAANNFGRFFTGQITAAGKVPPAKVLIIGGGVAGLAAAG 240 
WD40-rpts                                                                                      

Query      241 SARAMGAIVRGFDTRAAALEQFKSLGAEPLEVDIKESGEGQGGYAKEMSKEFIEAEMKLFAKQCLDVDIIITTALIPGRK 320 
WD40-rpts                                                                                      

Query      321 APVLITKEMVETMKDGSVVVDLAAEAGGNIETTVPGELSVHKGVIHVGYTDIPSRLPTQASTLYSNNITKLIRAISPDKE 400 
WD40-rpts                                                                                      

Query      401 TFYFDVKNEFDFGTMDHVIRGSVVMQDGKVLFPAPQPQNVPVAAPPKQKTVQELQKEKASAVSPFRATLTTAGVYTGGLG 480 
WD40-rpts                                                                                      

Query      481 TAIGLGLCAPNAAFTQMVTTFGLAGIVGYHTVWGVTPALHSPLMSVTNAISGLTAVGGLSLMGGGYLPSSTAETLAVLAA 560 
WD40-rpts                                                                                      

Query      561 FISSVNIAGGFLVTQRMLDMFKRPTDPPEYNYLYLLPTGVFVGGYGVALQSGYNIEQMMYLGSGLCCVGALGGLSTQSTA 640 
WD40-rpts                                                                                      

Query      641 RLGNALGMIGVAGGIAATFGVLKPSPELMAQMSAAMAVGGTAGLTIAKKIQISDLPQLVAAFHSLVGLAAVLTCVAEYMV 720 
WD40-rpts                                                                                      

Query      721 EYPHFATDPAANLTKIVAYLGTYIGGVTFSGSLVAYGKLQGLLNSAPLMLPGRHALNATLMAASVGGMIPYMLDPSYTTG 800 
WD40-rpts                                                                                      

Query      801 ITCLGSVSALSAVMGLTLTAAIGGADMPVVITVLNSYSGWALCAEGFLLNNNLLTIVGALIGSSGAILSYIMCVAMNRSL 880 
WD40-rpts                                                                                      

Query      881 ANVILGGYGTSSTGTGKPMEITGTHTEVNVDQTVDLIKEAHNIIIVPGYGLCAAKAQYPIADLVKSLTDQGKKVRFGIHP 960 
WD40-rpts                                                                           (__________

Query      961 VAGRMPGQLNVLLAEAGVPYDVVLEMDEINEDFPETDLVLVIGANDTVNSAAQEDPNSIIAGMPVLEVWKSKQVVVMKRS 1040
WD40-rpts      ___________________WD 1_____________________________)                           

Query     1041 LGVGYAAVDNPIFYKPNTSMLLGDAKKTCDALSAKVREG 1079
WD40-rpts                                             

1 WD40-repeats found in QUERY=ENSDARP00000032730 (Len=1079):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 22   950-1013     3.04  240.44  0.03522       25.0%     -2.29

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  950-1013   QGKKVRFGIHPVAGRMPGQLNVLLAEAGVPYDVVLEMDEINEDFPETDLVLVIGANDTVNSAAQ

   WD40 Template    TGECLR--------TLSGHT------SGVT----------SVSFSPDGKRLVSGSEDGTIKVWD