Input parameters:

  Query = ENSDARP00000033064 (Len=303)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000033064, Len=303):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSTQYSILFKQEHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAA 80  
WD40-rpts          (___________________WD 1___________________)(___________________WD 2________

Query       81 SSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDG 160 
WD40-rpts      ___________)   (_________________WD 3________________)   (_________________WD 4_

Query      161 KYLASGAIDGIINIFDIATGKLLHTLEGENRLLSSVSSIKAERLLDAFRMIMGYVNVLEKPVCVSGCPSGVLNFSFCHKT 240 
WD40-rpts      _______________)   (_______________WD 5______________)   (_________________WD 6_

Query      241 TPVLSSLSSSLFPFIQSKRSSVPSFYLSFHHSISVWSVKYNPTGSKIVSAGDDRAIHIYDCPM 303 
WD40-rpts      _______________)     (_________________WD 7________________)   

7 WD40-repeats found in QUERY=ENSDARP00000033064 (Len=303):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     5-48       7.94  442.54  6.8e-05       20.0%     52.09
  WD 2:  Seg  5    49-92       9.72  516.04  6.9e-06       42.5%     54.77
  WD 3:  Seg  9    96-134      9.65  513.46  7.5e-06       25.0%     54.86
  WD 4:  Seg 13   138-176     10.15  534.00  3.9e-06       37.5%     54.16
  WD 5:  Seg 17   180-214      5.34  335.14  0.00189       22.5%     49.55
  WD 6:  Seg 21   218-256      8.52  466.44  3.2e-05       22.5%     55.79
  WD 7:  Seg 25   262-300      9.05  488.31  1.6e-05       27.5%     54.23

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    5-48     YS----ILFKQEHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWK
   WD 2   49-92     WSDEKLELQWTLEGHQLGVVSVNISQN----GAIAASSSLDAHIRLWD
   WD 3   96-134    -G----KQIKSMDAGPVDAWTVAFSPD----SKYIATGSHLGKVNIFG
   WD 4  138-176    -G----KKEHSLDTRGKFILSIAYSPD----GKYLASGAIDGIINIFD
   WD 5  180-214    -G----KLLHTLEGENRLLSSVSSIKA----ERLLD----AFRMIMGY
   WD 6  218-256    -L----EKPVCVSGCPSGVLNFSFCHK----TTPVLSSLSSSLFPFIQ
   WD 7  262-300    -V----PSFYLSFHHSISVWSVKYNPT----GSKIVSAGDDRAIHIYD

   WD40 Template    TG----ECLRTLSGHTSGVTSVSFSPD----GKRLVSGSEDGTIKVWD