Input parameters:

  Query = ENSDARP00000033663 (Len=700)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000033663, Len=700):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAAQRQQQQPAPQQGNNSINPQMNSAGGAPMVQQQQDEMPRPQQYTIPGILHYIQHEWARFEMERAHWEVERAELQARIA 80  
WD40-rpts                                                                                      

Query       81 FLQGERKGQENLKNDLVRRIKMLEYALKQERAKYHKLKYGTELNQGEVKMPSFESEDTKDTEVSAIPQNSQLTWKQGRQL 160 
WD40-rpts                                                                                      

Query      161 LRQYLQEVGYTDTILDVRTQRVRSLLGLSGSEQNGSVETKNLEQILNGGESPAKRKGQDMKRNPEVLETFNFLENADDSD 240 
WD40-rpts                                                                                      

Query      241 EEDDDEGDIMEDVPDRSDKRRIKKHKIKVGNEGLASDLPDDPDTEDALKEFDFLVNAEDGEGAGEARSSGDGTEWAEPLP 320 
WD40-rpts                                   (____________WD 1____________)   (_________________

Query      321 FTPGGGKSFIMGSDDMLESVLGLGDLADLTVSNDEAEYSYDLPANKDAFRKTWNPKYTLRSHFDGVRALAFHPVEPVLVT 400 
WD40-rpts      WD 2_________________)                           (__________________WD 3________

Query      401 VSEDHTLKLWNLHKTVPAKKSASFDVEPIYTFRGHIGPVLSLAVTSSGEQCFSGGIDSTIQWWNIPSSNVDPYDTYDPSV 480 
WD40-rpts      __________)              (_________________WD 4________________)              (_

Query      481 LAGTLLGHSDAVWGLAYSGIKNRLLSCSADGTIKLWDPQEKIPCLSTFNSDKDHGVPTSVDFNGCDPAHMVASYNTGDAV 560 
WD40-rpts      ________________WD 5________________)(____________________WD 6__________________

Query      561 VYDLETSQPVVVFSAQGESAIPFGNHINKVVTHPTLPITVTAHEDRHIKFFDNKSGKAIHAMVAHLDAVTSLAIDPNGIY 640 
WD40-rpts      __)   (____________________WD 7____________________)   (_________________WD 8___

Query      641 LMSGSHDSSIRLWNLDSKTCVQEVTAHRKKSDEAIYDVAFHPSKAYIGSAGADALAKVFV 700 
WD40-rpts      _____________)   (___________________WD 9__________________)

9 WD40-repeats found in QUERY=ENSDARP00000033663 (Len=700):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2   270-299      3.48  258.40  0.02032       12.5%     21.94
  WD 2:  Seg  4   303-342      6.51  383.51  0.00042       25.0%     45.34
  WD 3:  Seg 10   370-411      9.09  490.16  1.5e-05       37.5%     44.45
  WD 4:  Seg 14   426-464      8.46  463.93  3.5e-05       32.5%     53.02
  WD 5:  Seg 18   479-517      8.88  481.68  2.0e-05       42.5%     46.07
  WD 6:  Seg 21   518-563      5.56  344.34  0.00142       32.5%     52.55
  WD 7:  Seg 25   567-612      6.22  371.46  0.00061       22.5%     56.41
  WD 8:  Seg 29   616-654     10.06  530.39  4.4e-06       35.0%     54.06
  WD 9:  Seg 33   658-700      6.76  393.81  0.00031       22.5%     49.88

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  270-299    --------------GN-------E----GLASDLPDDP-DT-E-DALKEFDFLVNAED
   WD 2  303-342    -A--G---EARSSGDG-------T----EWAEPLPFTP-GGGKSFIMGSDDMLESVLG
   WD 3  370-411    RKTWN---PKYTLRSH-------F----DGVRALAFHP-VE-PVLVTVSEDHTLKLWN
   WD 4  426-464    -V--E---PIYTFRGH-------I----GPVLSLAVTS-SG-EQCFSGGIDSTIQWWN
   WD 5  479-517    -S--V---LAGTLLGH-------S----DAVWGLAYSG-IK-NRLLSCSADGTIKLWD
   WD 6  518-563    PQ--EKIPCLSTFNSD-------K--DHGVPTSVDFNGCDP-AHMVASYNTGDAVVYD
   WD 7  567-612    -S--Q---PVVVFSAQGESAIPFG----NHINKVVTHP-TL-PITVTAHEDRHIKFFD
   WD 8  616-654    -G--K---AIHAMVAH-------L----DAVTSLAIDP-NG-IYLMSGSHDSSIRLWN
   WD 9  658-700    -K--T---CVQEVTAH-------RKKSDEAIYDVAFHP-SK-AYIGSAGADALAKVFV

   WD40 Template    TG--E---CLRTLSGH-------T----SGVTSVSFSP-DG-KRLVSGSEDGTIKVWD