Input parameters:

  Query = ENSDARP00000035593 (Len=1020)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000035593, Len=1020):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKRFRRHGHESQRDKHKQDLYQFNKTVEHGFPHQPSALGFSPSLELLAIGTRSGAIKLYGAPGVEFMGLHDENAAVTQVH 80  
WD40-rpts                         (__________________WD 1_________________)  (_________________

Query       81 FLPNQVELVTLLEDNSLHMWTLRAHNSMCELLEIGRFTLSGPPGAIPSVTRVTAVLAHSSGELLLLGTEGGHVFVVEVPG 160 
WD40-rpts      WD 2________________)             (___________________WD 3__________________)   

Query      161 FRELEENNISVEDVQNRVPEDYVGRRNLESVETLHENPLNPRQVLIGYSRGLMVLWDLDRQRPVQHFLGTQQLESVWWME 240 
WD40-rpts                   (___________________WD 4___________________)   (________________WD 

Query      241 DGESILSSHSDGSYCQWTVTGEDPQTEPEKQETPYGAFPCKAISKIIQLPSKQGPPFLIFSGGMPRASYGDRHCISVIHS 320 
WD40-rpts      5________________)                                                              

Query      321 KTHEALDFTSRIIDFFVIREGENHKGEPSALVVLVEEELVVVDLQTEGWPVIQTPYLVPLHCSAITCSHHVSSIPLKLWE 400 
WD40-rpts                                                          (___________________________

Query      401 RVQAAGAHQNTHYSRKPWPINGGKNLAPDPPQRDLLLTGHEDGTVRFWDASGVCLYPMYKLSTAGVFHTDADPNDNMNQG 480 
WD40-rpts      _________WD 6___________________________________)                               

Query      481 SEGEWPPFRKVGCFDPYSDDPRLGIQKIHLCKYSGYLTVAGTAGQILVLELNDEAAEQMVEATVVDLLQGQEGFRWKGQA 560 
WD40-rpts                 (_________________WD 7________________)                              

Query      561 RLDVREEPVLFPPGFQPFALVQCQPPAVVTAIALHSEWKLVGFGTSHGFGLYDYNQRNNIMVKCTLNPSDQMAMEGPLSR 640 
WD40-rpts                                                                                      

Query      641 VKSIKKSLRQSFRRIRRSRVSMRKHHTNNAAKLQEINARLEAEALQEMELAPVQRKIEARSSDDSFTGLVRTLYFADTFV 720 
WD40-rpts                                                                                      

Query      721 SDSSHSTPSLWAGTNGGAVFAYVLRVPPQERRAEDPVTAHAAKEIQLMHRAPVVGLVVLDGKGAPLPEPLEVAHDLARSP 800 
WD40-rpts                                                                                      

Query      801 EMHGSHHLLVVSEEQFKLFTLPKVSSKSKLKLTAVDGSRVRRVGVAWFGSRTDEQLESCLVVLTNQGELHVISLPSIKML 880 
WD40-rpts                                                                                      

Query      881 VHYPCIRREDVSGIASCVFTKYGQGFYLISPSEFERFSLSTRWVVQPHCLVEPPLQMRSKSPSSPVHRDLPDGVPTEHRN 960 
WD40-rpts                                                                                      

Query      961 FKGDSEGYENSARQVMEHALLNDESVLQEIQKSLEGDQTTFLENNLKTKPKAGNVLSNGD 1020
WD40-rpts                                                                  

7 WD40-repeats found in QUERY=ENSDARP00000035593 (Len=1020):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    20-60       6.12  367.29  0.00070       25.0%     45.28
  WD 2:  Seg  4    63-101      6.82  396.28  0.00028       30.0%     56.76
  WD 3:  Seg  9   115-157      3.75  269.45  0.01446       27.5%     42.61
  WD 4:  Seg 14   174-217      4.69  308.51  0.00432       15.0%     45.25
  WD 5:  Seg 17   221-258      5.43  339.00  0.00168       22.5%     54.29
  WD 6:  Seg 29   373-449      4.87  315.70  0.00346       27.5%     38.11
  WD 7:  Seg 33   492-530      2.93  235.62  0.04079       15.0%     39.28

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   20-60     LYQFN---KTVEHG---FPHQPSALGFSP-SLE---------------------------------------LLAIGTRSGAIKLYG
   WD 2   63-101    -GVEF---MGLH-D---ENAAVTQVHFLP-NQV---------------------------------------ELVTLLEDNSLHMWT
   WD 3  115-157    GRFTL---SGPP-GAIPSVTRVTAVLAHS-SGE---------------------------------------LLLLGTEGGHVFVVE
   WD 4  174-217    VQNRVPEDYVGR-R---NLESVETLHENPLNPR---------------------------------------QVLIGYSRGLMVLWD
   WD 5  221-258    -QRPV---QHFL-G---T-QQLESVWWME-DGE---------------------------------------SILSSHSDGSYCQWT
   WD 6  373-449    --QTP---YLVP-L---HCSAITCSHHVS-SIPLKLWERVQAAGAHQNTHYSRKPWPINGGKNLAPDPPQRDLLLTGHEDGTVRFWD
   WD 7  492-530    -GCFD---PYSD-D---PRLGIQKIHLCK-YSG---------------------------------------YLTVAGTAGQILVLE

   WD40 Template    TGECL---RTLS-G---HTSGVTSVSFSP-DGK---------------------------------------RLVSGSEDGTIKVWD