Input parameters:

  Query = ENSDARP00000038520 (Len=369)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000038520, Len=369):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAYHSFLLEPISCHAWNKDRTQIALCPNNHEVHIYNKAGNNWNKIHVLKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWT 80  
WD40-rpts      (_______________WD 1_______________)(___________________WD 2___________________)

Query       81 LKGDAWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLISVCYFEQDNDWWVCKHIKKPIRSTILCLDWHPNNVLLAAG 160 
WD40-rpts           (_________________WD 3________________)  (___________________WD 4__________

Query      161 SCDFKCRIFSAYIKEVEEKPAPTAWGSKMPFGEVMFESTGTSGWVHGVCFSDSGNRVAWASHDSTVAVAEGGKTAVCTSL 240 
WD40-rpts      _________)                     (_________________WD 5________________)   (______

Query      241 TSETLPLLCVTFITENSLVAAGHDCYPVLFVYDSNNAALSFGGKLDVPKQSAQKGMTARERFQNLDKKATTESKEAVLES 320 
WD40-rpts      __________WD 6________________)   (_______________WD 7______________)         (_

Query      321 LHKNSISQISLLDGGKAKCSKFCTTGMDGGMTIWDVKTLESAMKDLKIV 369 
WD40-rpts      _______________WD 8_______________)              

8 WD40-repeats found in QUERY=ENSDARP00000038520 (Len=369):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-36       6.47  382.00  0.00044        5.0%     40.51
  WD 2:  Seg  4    37-80       8.94  483.98  1.9e-05       25.0%     53.46
  WD 3:  Seg  8    86-124      7.49  424.01  0.00012       17.5%     53.34
  WD 4:  Seg 12   127-170      8.69  473.48  2.6e-05       17.5%     53.22
  WD 5:  Seg 16   192-230      8.07  448.08  5.7e-05       32.5%     58.12
  WD 6:  Seg 20   234-271      5.95  360.29  0.00087       15.0%     56.32
  WD 7:  Seg 24   275-309      4.11  284.24  0.00916        7.5%      9.74
  WD 8:  Seg 26   319-355      6.27  373.83  0.00057       22.5%     43.93

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-36     ------------MAYHSFLLEPISCHAWNKDRT----QIALCPNNHEVHIYN
   WD 2   37-80     KAGNNWN----KIHVLKEHNGQVTGIDWAPESN----RIVTCGTDRNAYVWT
   WD 3   86-124    -W----K----PTLVILRINRAARCVKWSPKEN----KFAVGSGSRLISVCY
   WD 4  127-170    QD----NDWWVCKHIKKPIRSTILCLDWHPNNV----LLAAGSCDFKCRIFS
   WD 5  192-230    -G----E----VMFESTGTSGWVHGVCFSDSGN----RVAWASHDSTVAVAE
   WD 6  234-271    -T----A----VCTSLTSETLPLLCVTFITENS----LVAAGH-DCYPVLFV
   WD 7  275-309    -N----N----AALSFGGK----LDVPKQSAQK----GMTARERFQNLDKKA
   WD 8  319-355    ---------------ESLHKNSISQISLLDGGKAKCSKFCTTGMDGGMTIWD

   WD40 Template    TG----E----CLRTLSGHTSGVTSVSFSPDGK----RLVSGSEDGTIKVWD