Input parameters:

  Query = ENSDARP00000038921 (Len=672)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000038921, Len=672):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 SSSVLSTVTSQKTLIPLFDSDSGLLILSGNGESVIDCFEVNTSEPFLSQVSQCVADSSSRGVCLLPKLALDISCCEVLRL 80  
WD40-rpts      (_________________WD 1________________)                                         

Query       81 MQLTENFIVPISYQVPRKAGQDFHADLYPDTVGHTAAMSADEWWKGDNKQVERVSLHPSKRPKPAAPSAQEKAQKDLSRG 160 
WD40-rpts                                                                                     (

Query      161 KSKEEASSSSSPLSSPSSSAVPSRSPSSTSGLSSGFVPSPSPSQSSRAIHNMLGPSSKFRHIQGSVLHRDTHITNLRGLH 240 
WD40-rpts      _________________WD 2________________)                                          

Query      241 LTTPGECDGFCANGQRVAVPLAIAGGQIAVFELSQPGKLPDTALPTIQNSVNVADFCWDPFDPHRLVVAGDDAKIRVWQI 320 
WD40-rpts                                      (_____________________WD 3____________________) 

Query      321 PKGGLQETLTEPECVLRGHTEKIYSVKFHPHAIGLLVSSSYDLTVRLWSLETGEQVKQLSGHQDQIFGMAWSPDGKLLAT 400 
WD40-rpts                   (_______________WD 4_______________)   (_________________WD 5______

Query      401 VCKDGKVRLYDPRKSTSPIQEGPGPEGQRGARVVWVCGGKFLMVSGFDSRSERQLYLFSAESLASGSLASAPADVSPSTL 480 
WD40-rpts      __________)       (__________________WD 6_________________)         (___________

Query      481 IPFYDPDTSVLILTGKGDTRVYIYEIVPEAPYFMECSSFNSSEPHKGLCFLPKTECDVRDVEVARAVRLGKTTIEPVAFR 560 
WD40-rpts      _____WD 7_______________)                                                       

Query      561 VPRVKKEFFQDDVFPDTAVWWESSLSAADWLSGSDGQHRKISLRPKDMTPVSEAPKEAPVRKYLPSSVYLEEKTDEQKKE 640 
WD40-rpts                                                                                      

Query      641 ELLSAMVAKLGNREDPLPQESYEGVDEDEWDD 672 
WD40-rpts                                      

7 WD40-repeats found in QUERY=ENSDARP00000038921 (Len=672):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-39       3.12  243.55  0.03203       20.0%     51.36
  WD 2:  Seg  9   160-198      4.70  308.89  0.00427       20.0%     -20.03
  WD 3:  Seg 14   273-319      6.63  388.60  0.00036       25.0%     43.19
  WD 4:  Seg 17   334-369      7.04  405.35  0.00021       37.5%     47.67
  WD 5:  Seg 20   373-411      9.54  508.73  8.6e-06       37.5%     54.58
  WD 6:  Seg 24   419-459      2.91  234.91  0.04169       15.0%     41.78
  WD 7:  Seg 27   469-505      4.21  288.54  0.00802       10.0%     46.72

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-39     SSS------VLSTVT--SQK-TLIPLFDS-D-S-GLLILSGNGES----VIDCFE
   WD 2  160-198    -GK------SKEEASSSSSP-LSSPSSSA-V-P-SRSP-SSTSGL----SSGFVP
   WD 3  273-319    LSQPGKLPDTALPTIQNSVN-VADFCWDPFD-P-HRLV-VAGDDA----KIRVWQ
   WD 4  334-369    -----------CVLRGHTEK-IYSVKFHP-H-AIGLLV-SSSYDL----TVRLWS
   WD 5  373-411    -GE------QVKQLSGHQDQ-IFGMAWSP-D-G-KLLA-TVCKDG----KVRLYD
   WD 6  419-459    ----------IQEGPGPEGQRGARVVWVC-G-G-KFLM-VSGFDSRSERQLYLFS
   WD 7  469-505    ----------ASAPADVSPS-TLIPFYDP-DTS-VLIL-TGKGDT----RVYIYE

   WD40 Template    TGE------CLRTLSGHTSG-VTSVSFSP-D-G-KRLV-SGSEDG----TIKVWD