Input parameters:

  Query = ENSDARP00000039257 (Len=410)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000039257, Len=410):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDVNDELDKKFAGLLEKKWTSVIRLQKKVMELESKLNEAKEEIT 80  
WD40-rpts                                                                                      

Query       81 LGGPVGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQ 160 
WD40-rpts                          (_______________WD 1_______________)   (_________________WD 

Query      161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMV 240 
WD40-rpts      2________________)   (_________________WD 3________________)   (________________

Query      241 RPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTI 320 
WD40-rpts      _WD 4________________)   (___________________________WD 5_______________________

Query      321 KMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKTSPYVVTGSV 400 
WD40-rpts      ___)   (_________________WD 6________________)   (_________________WD 7_________

Query      401 DQTVKVWECR 410 
WD40-rpts      _______)  

7 WD40-repeats found in QUERY=ENSDARP00000039257 (Len=410):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3   101-136      9.78  518.56  6.4e-06       52.5%     48.58
  WD 2:  Seg  6   140-178     10.73  557.86  1.9e-06       52.5%     56.24
  WD 3:  Seg 10   182-220     10.86  563.37  1.6e-06       45.0%     56.99
  WD 4:  Seg 14   224-262     10.25  537.90  3.5e-06       40.0%     54.67
  WD 5:  Seg 18   266-324      7.77  435.67  8.4e-05       45.0%     54.91
  WD 6:  Seg 22   328-366     10.74  558.15  1.9e-06       45.0%     56.71
  WD 7:  Seg 26   370-408     10.23  537.39  3.6e-06       42.5%     53.69

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  101-136    ---KYALSGHRSPVTRVIFHPV--------------------FSLMVSASEDATIKVWD
   WD 2  140-178    GDFERTLKGHTDSVQDISFDQT--------------------GKLLASCSADMTIKLWD
   WD 3  182-220    FECIRTMHGHDHNVSSVAIMPN--------------------GDHIVSASRDKTMKMWE
   WD 4  224-262    GYCVKTFTGHREWVRMVRPNQD--------------------GTLLASCSNDQTVRVWV
   WD 5  266-324    KECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWD
   WD 6  328-366    GMCLMTLVGHDNWVRGVLFHPG--------------------GRFVVSCADDKTLRIWD
   WD 7  370-408    KRCMKTLSAHEHFVTSLDFHKT--------------------SPYVVTGSVDQTVKVWE

   WD40 Template    GECLRTLSGHTSGVTSVSFSPD--------------------GKRLVSGSEDGTIKVWD