Input parameters:

  Query = ENSDARP00000039748 (Len=821)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000039748, Len=821):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAAPVMDTCHVSCCANRAPNVVSWGRGGLIAFGTCNSVAIYNPEEIRVVDLLNKHTGRVNAVQWVHEPDCSPENQLISGG 80  
WD40-rpts          (________________WD 1________________)   (___________________WD 2___________

Query       81 SDNNVIVWEKLDGKFRACAVCSGHSGPVCAVDAVSLSSSHLLVASASSDSTVKLWTYSSDAAECLQTVAFGSGFMMDVSL 160 
WD40-rpts      ________)     (__________________WD 3__________________)     (__________________

Query      161 ALLPGSRVPVLACGGDDSRVHLYVQLSGQFQRVLTLTGHEDWVRGVEWANKDGELWLASCSQDCLIRVWRLFAKTAAEPD 240 
WD40-rpts      _WD 4__________________)     (__________________WD 5_________________)          

Query      241 LQTDGIIKMKENIFQVSGEEFAVTLETVLAGHENWVYGIHWQPPSVKGDSVEQSLKLLSASMDKTMILWGPEEDSGMWVE 320 
WD40-rpts                      (________________________WD 6________________________)(_________

Query      321 MVRVGEVGGNTLGFYGCQMSPDGSMILAHAFHGALHLWHHDSNQEWRPSVVISGHFNAVQDMSWDPEGEFIITVGSDQTT 400 
WD40-rpts      _____________WD 7_____________________)      (_________________WD 8_____________

Query      401 RLFTPWTRKGSSQITWHEISRPQIHGYDMQCLTMVGRFQFVSGADEKVLRVFKAPRNFVENFAHISGTSLEKLLGCNDIA 480 
WD40-rpts      ___)   (____________________WD 9____________________)          (________________

Query      481 DLPEGASTPALGLSNKAVFQGDLASPSPQQDGGDFNSLSDQYKESYFQPLKLAEPPTEDDLLQNTLWPEVQKLYGHGFEM 560 
WD40-rpts      _WD10________________)      (_________________WD11________________)_____________

Query      561 FCLASDCARTVVASACKASKAEHASILLWSTASWKQLQSLSCHSLTITQMAFSPNGQLLLAVSRDRTWSLWRRGNPDLDT 640 
WD40-rpts      ______WD12___________________)   (_________________WD13________________)        

Query      641 EAMFSLYANTSKDTSVHTRIIWSCDWSADNKYFVTSSRDKKVIIWGHAGSGVAVGEGEDARVTSCSSVLDVGDSATAVSI 720 
WD40-rpts             (_________________WD14________________)                      (___________

Query      721 CPFLCSDHSYLLAVGLENGQILLYKWKPLEDLSSESDWSRCKDTDACQGHTMVVKRLRWRPRLGRGGHGGQDSKEEQAWV 800 
WD40-rpts      _____WD15_______________)               (_________________________WD16__________

Query      801 QLASAGADHVVKIFDINLSAL 821 
WD40-rpts      ______________)      

16 WD40-repeats found in QUERY=ENSDARP00000039748 (Len=821):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     5-42       3.61  263.88  0.01717       10.0%     51.16
  WD 2:  Seg  5    46-89       6.54  384.68  0.00041       27.5%     53.86
  WD 3:  Seg  9    95-136      7.09  407.48  0.00020       32.5%     55.45
  WD 4:  Seg 13   142-184      4.98  320.44  0.00299       25.0%     56.15
  WD 5:  Seg 17   190-230      7.11  408.38  0.00020       32.5%     50.38
  WD 6:  Seg 23   257-310      6.74  393.20  0.00031       32.5%     52.71
  WD 7:  Seg 27   311-359      7.38  419.43  0.00014       25.0%     57.67
  WD 8:  Seg 31   366-404      8.04  446.96  5.9e-05       22.5%     51.51
  WD 9:  Seg 35   408-453      4.50  300.41  0.00556       15.0%     35.90
  WD10:  Seg 39   464-502      4.32  293.01  0.00699       15.0%     33.41
  WD11:  Seg 43   509-547      3.30  251.03  0.02548        7.5%      5.32
  WD12:  Seg 44   547-590      4.93  318.47  0.00318       17.5%     47.25
  WD13:  Seg 48   594-632      9.35  500.97  1.1e-05       35.0%     56.91
  WD14:  Seg 52   648-686      8.50  465.63  3.3e-05       27.5%     43.41
  WD15:  Seg 57   709-745      4.01  280.42  0.01031       17.5%     22.42
  WD16:  Seg 59   761-815      4.23  289.53  0.00778       27.5%     39.32

Multiple sequence alignment of 16 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    5-42     VMD---------TCHVSCCANRAPNVV------S--WGR---------G-----G--------------------L-IA-----FGTCNSVAIYN
   WD 2   46-89     -IR---------VVDLLNKHTGRVNAV------Q--WVH---------EPDCSPEN--Q----------------L-IS-----GGSDNNVIVWE
   WD 3   95-136    -FR---------ACAVCSGHSGPVCAV---DAVS--LSS---------S-----HL--L----------------V-AS-----ASSDSTVKLWT
   WD 4  142-184    -AE---------CLQTVAFGSGFMMDV------SLALLP---------G-----SRVPV----------------L-AC-----GGDDSRVHLYV
   WD 5  190-230    -FQ---------RVLTLTGHEDWVRGV------E--WAN---------K-----DG--E--------------LWL-AS-----CSQDCLIRVWR
   WD 6  257-310    SGE----EFAVTLETVLAGHENWVYGI------H--WQPPSVKGDSVEQ-----SL--K----------------L-LS-----ASMDKTMILWG
   WD 7  311-359    PEEDSGMWVEMVRVGEVGGNTLGFYGC------Q--MSP---------D-----GS--M----------------I-LA-----HAFHGALHLWH
   WD 8  366-404    -WR---------PSVVISGHFNAVQDM------S--WDP---------E-----GE--F----------------I-IT-----VGSDQTTRLFT
   WD 9  408-453    -RK---------GSSQITWHEISRPQIHGYDMQC--LTM---------V-----GR-FQ----------------F-VS-----GADEKVLRVFK
   WD10  464-502    HIS-----------GTSLEKLLGCNDI------A--DLP---------E-----GA--S----------------TPAL-----GLSNKAVFQGD
   WD11  509-547    -QQ---------DGGDFNSLSDQYKES------Y--FQP---------L-----KL--A----------------E-PP-----TEDDLLQNTLW
   WD12  547-590    -WP---------EVQKLYGHGFEMFCL------A--SDC---------A-----RT--V----------------V-ASACKASKAEHASILLWS
   WD13  594-632    -WK---------QLQSLSCHSLTITQM------A--FSP---------N-----GQ--L----------------L-LA-----VSRDRTWSLWR
   WD14  648-686    -AN---------TSKDTSVHTRIIWSC------D--WSA---------D-----NK--Y----------------F-VT-----SSRDKKVIIWG
   WD15  709-745    ------------LDVGDSATAVSICPF------L--CSD---------H-----SY--L----------------L-AV-----GLENGQILLYK
   WD16  761-815    -CK---------DTDACQGHTMVVKRL------R--WRP---------R-----LG--RGGHGGQDSKEEQAWVQL-AS-----AGADHVVKIFD

   WD40 Template    TGE---------CLRTLSGHTSGVTSV------S--FSP---------D-----GK--R----------------L-VS-----GSEDGTIKVWD