Input parameters:

  Query = ENSDARP00000045678 (Len=760)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000045678, Len=760):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MYPQGRHPAPHQPGQPGFKFTVAESCDRIKDEFQFLQAQYHSLKVEYDKLANEKTEMQRHYVMYYEMSYGLNIEMHKQTE 80  
WD40-rpts                                                                                      

Query       81 IAKRLNAILAQIMPFLSQEHQQQVAQAVERAKQVTMTELNAIIGVRGLPNLPLTQQQLQAQHLSHAAHGPVALPPHPSGL 160 
WD40-rpts                                                                                      

Query      161 QPPGIPPVTGSGSGLLALGALGSQPHLPVKDEKNHHDLEHRENNSISPSDSLRTTSEKHRGSSDYSLDSKKRKVEDKDSM 240 
WD40-rpts                                                                                      

Query      241 SRYDSDGDKSDDLVVDVSNEDPATPRGSPAHSPPENGIDKPRPAKKDTPNSPASVASSGSTPSSKNKEHGHNDKSSTPGL 320 
WD40-rpts                                                                                      

Query      321 KSNTPTPRNDAPTPGTSTTPGLRPILGKPPMEALAAPALRTPLTYPTPFAMMSHHEMNGSLTNPGVYAGLHISPQMSAAA 400 
WD40-rpts                                                                                      

Query      401 AAAYGRSPMAGFEHPHMRAPGLPASLTSISGGKPAYSFHVSADGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAV 480 
WD40-rpts                      (____________________WD 1___________________)   (_______________

Query      481 TISNPTRHVYTGGKGCVKIWDISQPGSKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLTIWDLASQTPRIKAEL 560 
WD40-rpts      _WD 2_______________)(_____________________WD 3____________________)     (______

Query      561 TSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISHDGTKLWTGGLDNTVRSWDLREGRQ 640 
WD40-rpts      ___________WD 4________________)   (_________________WD 5________________)(_____

Query      641 LQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHHTKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG 720 
WD40-rpts      _____________WD 6_________________)  (_________________WD 7________________)(___

Query      721 ASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY 760 
WD40-rpts      _______________WD 8_________________)   

8 WD40-repeats found in QUERY=ENSDARP00000045678 (Len=760):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   417-461      3.92  276.57  0.01161       20.0%     23.13
  WD 2:  Seg  7   465-501      5.97  361.07  0.00085       27.5%     48.15
  WD 3:  Seg 11   502-548      7.41  420.65  0.00013       25.0%     48.07
  WD 4:  Seg 14   554-592      8.57  468.72  3.0e-05       30.0%     55.73
  WD 5:  Seg 18   596-634      9.94  525.44  5.1e-06       35.0%     54.65
  WD 6:  Seg 22   635-675      6.96  402.27  0.00024       25.0%     51.76
  WD 7:  Seg 26   678-716      8.47  464.63  3.4e-05       30.0%     53.02
  WD 8:  Seg 30   717-757      7.61  429.15  0.00010       32.5%     55.75

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  417-461    MRAPGLP-------ASLTSI-SGGKPAYSFHVSADGQMQPVPFPPDALIGPGI
   WD 2  465-501    -A----R-------QINTL--SHGEVVCAVTISNPTRHV-YTGG-KGCVKIWD
   WD 3  502-548    IS----QPGSKSPVSQLDCL-NRDNYIRSCKLLPDGRTL-IVGGEASTLTIWD
   WD 4  554-592    -P----R-------IKAELT-SSAPACYALAISPDAKVC-FSCCSDGNIAVWD
   WD 5  596-634    -Q----T-------LVRQFQ-GHTDGASCIDISHDGTKL-WTGGLDNTVRSWD
   WD 6  635-675    LR----E-------GRQLQQHDFTSQIFSLGYCPTGEWL-AVGMESSNVEVLH
   WD 7  678-716    -K----P-------DKYQLH-LHESCVLSLKFAYCGKWF-VSTGKDNLLNAWR
   WD 8  717-757    TP----Y------GASIFQS-KESSSVLSCDISADDKYI-VTGSGDKKATVYE

   WD40 Template    TG----E-------CLRTLS-GHTSGVTSVSFSPDGKRL-VSGSEDGTIKVWD