Input parameters:

  Query = ENSDARP00000050905 (Len=769)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000050905, Len=769):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 FSPNAAMEKITEKILLEKSSTKTNKLDQIKTLNLSRMSLKSEDLPVPLLSKLCRLEKLDLSGNMLQKIPKGLRLPCLKIL 80  
WD40-rpts                                                                                      

Query       81 NCSNNDMEDVLSLEALTNLEELRLEDNLYLTVNDEHKVIFLLPNLRMFNGKDISSTAHHIRHGSTEILRKRVIGVWERDF 160 
WD40-rpts                                                                                      

Query      161 SLPDPISAKSLAAVEKSFVNAACTQVKYGPNSLSDYTKWRVEKIAKEYLKSLTSSEEEERVADTTPTKENKTKACDVGGN 240 
WD40-rpts                                                                                      

Query      241 SITSPQKRTRNNTDVVAEASPRKSSRLVSAAPVEASPRKSARVLNTPQKTQPVVSSPRKHARLTSAETPESSPRKSSRLE 320 
WD40-rpts                       (_____________________WD 1_____________________)               

Query      321 NVTQKAASQTESPRKPGMSTPTSKQAKCESPRKQSKQSTAKMEKSTPRKTTKAKLQVPQEPVSLTPLHVLQCHSRQNDPD 400 
WD40-rpts                                                                                      

Query      401 DFSTQLWACAFEPQQDDSIDISGGSQTIATCGGETLCVINCESGLVLKKYKVPGEDFFSLAWSTVLMSRTGGSARPCNIL 480 
WD40-rpts                                                 (______________________WD 2__________

Query      481 AAGGKRGCVKLIHPRVNLAFGEFRVSRRAISIMRFNPRKPTFLFTGTYDKKIFLWDIGGLDQDYNFKISKLLTLETSSTP 560 
WD40-rpts      ____________)   (_________________WD 3_________________)(______________________W

Query      561 LHLALLPSSPDTHLLSGCDEGLYCFDVQLSKNTLKRNEEIEIVFPIYKKNDKKNNYRTIDGLSFLSDDVVASKSHMQGSI 640 
WD40-rpts      D 4______________________)                 (__________________WD 5______________

Query      641 YLWSWSATRASWNSRKKEVPAVILAELQWSSTDIPYLSLGTCPGYGYVVCGDEQGRLWMYHITDTMMENFKSGKTISATE 720 
WD40-rpts      ___)                       (______________WD 6______________)   (_______________

Query      721 VLQWPSPIRAGKGALEGPSINSTAMDPGLHYLVALTDKNMVVVWKRESH 769 
WD40-rpts      _____________WD 7___________________________)    

7 WD40-repeats found in QUERY=ENSDARP00000050905 (Len=769):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   258-305      3.10  242.91  0.03267       10.0%     -8.24
  WD 2:  Seg  8   444-493      6.00  362.68  0.00081       20.0%     51.49
  WD 3:  Seg 12   497-536      7.53  425.85  0.00011       20.0%     50.87
  WD 4:  Seg 16   537-586      6.91  400.05  0.00025       15.0%     47.74
  WD 5:  Seg 21   604-644      7.09  407.55  0.00020       15.0%     37.16
  WD 6:  Seg 25   668-701      5.26  331.93  0.00209       17.5%     45.00
  WD 7:  Seg 27   705-765      4.91  317.66  0.00326       22.5%     39.91

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  258-305    EA----------SPRKSSRLVSAA-PVEASPRK----------------------SARVLNTP-Q-----------KTQPVVSSPRKHARLTS
   WD 2  444-493    -G----------L--------VLK-KYKVPGED----------------------FFSLAWST-VLMSRTGGSARPCNILAAGGKRGCVKLIH
   WD 3  497-536    -N----------L--------AFG-EFRVSRRA----------------------ISIMRFNPRK-----------PTFLFTGTYDKKIFLWD
   WD 4  537-586    IGGLDQDYNFKIS--------KLL-TLETSSTP----------------------LHLALLPS-S-----------PDTHLLSGCDEGLYCFD
   WD 5  604-644    FP----------I--------YKKNDKKNNYRT----------------------IDGLSFLS-D-----------DVVASKSHMQGSIYLWS
   WD 6  668-701    QW-------------------------SSTDIP----------------------YLSLGTCP-G-----------YGYVVCGDEQGRLWMYH
   WD 7  705-765    -T----------M--------MEN-FKSGKTISATEVLQWPSPIRAGKGALEGPSINSTAMDP-G-----------LHYLVALTDKNMVVVWK

   WD40 Template    TG----------E--------CLR-TLSGHTSG----------------------VTSVSFSP-D-----------GKRLVSGSEDGTIKVWD