Input parameters:

  Query = ENSDARP00000052711 (Len=323)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000052711, Len=323):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MARPPPDPLYILRGSGASVNALHFCCDGDGPPLLYSGSGKGAVHVWNLSTRRAERVLESHAGNSVIWLNTFNNSRSCLIS 80  
WD40-rpts          (___________________WD 1__________________)   (__________________WD 2_______

Query       81 QGRDMRVCVWDLSEGRSAVTDSLHTGSVGFCQCSLLESRLGSTLLAHPTQHMEEVSVVEMSSWTQVCSLKPDSNLGMLMS 160 
WD40-rpts      __________)   (____________________WD 3___________________)   (_________________

Query      161 MKMWQADSGPVLCAGYEDGSVVLWDVSHRRPFSLLKVHPEPVMSLDVDVCRQKGISGSSENILQSWRLDNQQSLQMHDSI 240 
WD40-rpts      __WD 4__________________)   (_________________WD 5________________)(____________

Query      241 QMTNPGVSQLRIRADGKILASAGWDNNIRVFGWKKLKPLAVLQHHTDMVNSVAFSDHQDPTQRLLAAGSKDQRISVWSIY 320 
WD40-rpts      ________WD 6___________________)   (___________________WD 7__________________)  

Query      321 SES 323 
WD40-rpts         

7 WD40-repeats found in QUERY=ENSDARP00000052711 (Len=323):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     5-47       8.65  471.84  2.7e-05       35.0%     55.13
  WD 2:  Seg  5    51-91       8.07  447.88  5.7e-05       27.5%     56.71
  WD 3:  Seg  9    95-139      6.16  369.13  0.00066       27.5%     55.69
  WD 4:  Seg 13   143-185      7.48  423.48  0.00012       22.5%     57.16
  WD 5:  Seg 17   189-227      9.02  487.42  1.7e-05       20.0%     55.46
  WD 6:  Seg 21   228-272      8.54  467.30  3.1e-05       25.0%     50.24
  WD 7:  Seg 25   276-318      8.66  472.45  2.7e-05       42.5%     56.03

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    5-47     PP-----DPLYILRGSG--ASVN----ALHFC----CDGDGPPLLYSGSGKGA--VHVWN
   WD 2   51-91     -R-----RAERVLESHAGNSVIW----LNTFN----NSRS---CLISQGRDMR--VCVWD
   WD 3   95-139    -G-----RSAVTDSLHT--GSVGFCQCSLLES----RLGS---TLLAHPTQHMEEVSVVE
   WD 4  143-185    -W-----TQVCSLKPDS--NLGMLMSMKMWQA----DSGP---VLCAGYEDGS--VVLWD
   WD 5  189-227    -R-----RPFSLLKVHP--EPVM----SLDVD----VCRQ---KGISGSSENI--LQSWR
   WD 6  228-272    LDNQQSLQMHDSIQMTN--PGVS----QLRIR----ADGK---ILASAGWDNN--IRVFG
   WD 7  276-318    -L-----KPLAVLQHHT--DMVN----SVAFSDHQDPTQR---LLAAGSKDQR--ISVWS

   WD40 Template    TG-----ECLRTLSGHT--SGVT----SVSFS----PDGK---RLVSGSEDGT--IKVWD