Input parameters:

  Query = ENSDARP00000054317 (Len=358)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000054317, Len=358):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSAALEKPQIIAHIQKSLNYTVFESKWIPCSAKFVCMGNFARGTGVMQIYEIQHGELQLVREIEKSKPIKCGTFGATSLQ 80  
WD40-rpts                     (_______________WD 1_______________)(____________________WD 2____

Query       81 QRHLATGDFDGNLNVWNLEVPDSPVYSVKAHKEIINAIDGVGGLGIGDGAPEIVTGSRDGTVKVWDSRQKDTPVVNMEPT 160 
WD40-rpts      ________________)            (________________WD 3_______________)            (_

Query      161 EGETKRDCWTVAFGHAFNDQDRCVCAGYDNGDIKLFDLRNMSLRWEKNIRNGVCSVEFDRKDINMNKLVATSLEGKFHVF 240 
WD40-rpts      ________________WD 4________________)(___________________WD 5___________________

Query      241 DMRTQHPSKGFASVSEKAHKSTIWQVRHLPQNRDVFMTAGGAGNLHLWKYEYPAQRSKKGADDVEMGVAGSVNLLQNVTL 320 
WD40-rpts      )        (_________________WD 6_________________)                (______________

Query      321 STQPISSLDWSPDKQGLCVCSSFDQSVRVLIVTKLNTV 358 
WD40-rpts      ______WD 7____________________)       

7 WD40-repeats found in QUERY=ENSDARP00000054317 (Len=358):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    16-51       3.00  238.78  0.03706        7.5%     20.63
  WD 2:  Seg  4    52-97       6.17  369.47  0.00065       22.5%     57.26
  WD 3:  Seg  9   110-146      6.85  397.80  0.00027       30.0%     33.51
  WD 4:  Seg 14   159-197      7.54  426.02  0.00011       17.5%     38.97
  WD 5:  Seg 17   198-241      6.25  372.98  0.00059       17.5%     49.35
  WD 6:  Seg 21   250-289      6.89  399.35  0.00026       17.5%     51.02
  WD 7:  Seg 25   306-351      7.47  423.37  0.00012       30.0%     50.75

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   16-51     -------------KSLNYTVFESKWIPC---SAKFVC-M-GNFARGTGVMQIYE
   WD 2   52-97     IQ-----HGELQLVREIEKSKPIKCGTFGATSLQQRH-L-ATG-DFDGNLNVWN
   WD 3  110-146    -----------AHKEIINAIDGVGGLGI---GDGAPE-I-VTG-SRDGTVKVWD
   WD 4  159-197    -P-----T---EGETKRDCWTVAFGHAF---NDQDRC-V-CAG-YDNGDIKLFD
   WD 5  198-241    LR-NMSLR---WEKNIRNGVCSVEFDRK---DINMNK-L-VAT-SLEGKFHVFD
   WD 6  250-289    -G-----F---ASVSEKAHKSTIWQVRH---LPQNRDVF-MTA-GGAGNLHLWK
   WD 7  306-351    MGVAGSVN---LLQNVTLSTQPISSLDW---SPDKQG-LCVCS-SFDQSVRVLI

   WD40 Template    TG-----E---CLRTLSGHTSGVTSVSF---SPDGKR-L-VSG-SEDGTIKVWD