Input parameters:

  Query = ENSDARP00000057958 (Len=236)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000057958, Len=236):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 IEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSARFLLDNARIVSGSYDRTLKLWDLRSKVCMKTVFAGSS 80  
WD40-rpts       (________WD 1________)   (_________________WD 2________________)   (___________

Query       81 CNDIVCTEQCVMSGHFDKKVRFWDIRAESIVRELELMGRVTSLDLNHDRTELLTCSRDDLVKIIDLRTNAVRQTFNAQGF 160 
WD40-rpts      ____WD 3_______________)   (________________WD 4________________)   (___________

Query      161 KCGSDFTRVTFSPDGSFVAAGSADGVLYLWNVLTGKLEKTLDKGHSSAINSVSWSLSGAFVASVEKGSKAVLWSDM 236 
WD40-rpts      ________WD 5__________________)   (_________________WD 6_________________)  

6 WD40-repeats found in QUERY=ENSDARP00000057958 (Len=236):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     2-23       3.40  255.06  0.02252       15.0%     33.25
  WD 2:  Seg  3    27-65      10.52  549.11  2.5e-06       45.0%     55.85
  WD 3:  Seg  7    69-104      6.98  403.05  0.00023       20.0%     46.49
  WD 4:  Seg 11   108-145      7.50  424.39  0.00012       27.5%     52.51
  WD 5:  Seg 15   149-191      8.73  475.28  2.4e-05       35.0%     56.29
  WD 6:  Seg 19   195-234      8.67  472.96  2.6e-05       32.5%     53.66

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    2-23     ----------------------EFDSAGSYLLAASNDFASRIWT
   WD 2   27-65     YRLRHTL-TGHS----GKVLSARFLLDNARIVSGSYDRTLKLWD
   WD 3   69-104    KVCMKTV-FAGS----S---CNDIVCTEQCVMSGHFDKKVRFWD
   WD 4  108-145    ESIVREL-ELM-----GRVTSLDLNHDRTELLTCSRDDLVKIID
   WD 5  149-191    NAVRQTF-NAQGFKCGSDFTRVTFSPDGSFVAAGSADGVLYLWN
   WD 6  195-234    GKLEKTLDKGHS----SAINSVSWSLSGAFVASVEKGSKAVLWS

   WD40 Template    GECLRTL-SGHT----SGVTSVSFSPDGKRLVSGSEDGTIKVWD