Input parameters:

  Query = ENSDARP00000059532 (Len=453)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000059532, Len=453):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 METEEGADGPGGPGPGLGLCCASFNQDSTSLAVGTKTGYRLFSVTSVDKLDCIHESAETPEVYIVERLFSSSLVVVVSQS 80  
WD40-rpts          (_________________WD 1________________)(____________________WD 2____________

Query       81 MPRRMNVYHFKKGTEICNYSYSNNILAVRLNRQRLVVCLEESIYIHNIKDMKLLKTLLNTPSNPSGLCALSINHSNSFLA 160 
WD40-rpts      ________)(________________WD 3________________)      (__________________WD 4____

Query      161 YPGSDTIGEIIVYDANNLSTVTMIPAHDSPLAAITFSASGTKLASASERGTVIRVFSIPEGLRLFEFRRGMKRYVNISSL 240 
WD40-rpts      _____________)   (_________________WD 5_________________)(____________________WD

Query      241 SFSPDAQFLCASSNTETVHIFKLEQHSPSGEEEAPSWSAYVGKMFTAASSYLPAQVSGMMSQDRAFATVRLQMAGQRNVC 320 
WD40-rpts       6___________________)   (_________________WD 7_________________)(______________

Query      321 ALATIQKLPRLLVASSDGQLFIYNIDPQDGGECTLVQKHRLFGSDKEWEETNQSDMTEAPQACQSYAATVAIPTSGPVTA 400 
WD40-rpts      ___WD 8________________)                  (________________________WD 9_________

Query      401 TLTGYSEDGGAKKGEVIPEHEFAAGPVCLDDETEFPPINWCRDGSGRGKGRRP 453 
WD40-rpts      ______________)                                      

9 WD40-repeats found in QUERY=ENSDARP00000059532 (Len=453):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     5-43       6.45  381.22  0.00045       20.0%     37.61
  WD 2:  Seg  4    44-89       6.13  367.81  0.00069       15.0%     39.07
  WD 3:  Seg  8    90-127      3.61  263.89  0.01717        5.0%     44.66
  WD 4:  Seg 12   134-174      5.95  360.56  0.00086       25.0%     45.00
  WD 5:  Seg 16   178-217      8.25  455.45  4.5e-05       32.5%     55.92
  WD 6:  Seg 20   218-262      7.15  410.09  0.00018       30.0%     49.89
  WD 7:  Seg 23   266-305      3.88  275.00  0.01219        7.5%      9.14
  WD 8:  Seg 26   306-344      7.43  421.65  0.00013       17.5%     55.32
  WD 9:  Seg 31   363-415      5.33  334.67  0.00192       22.5%     19.05

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    5-43     EG-------------A------DGPGGP-----GPG-LGLCCASFNQDSTSLAVGT-K--TG-YRLFS
   WD 2   44-89     VT-------------SVDKLDCIHESAE-----TPE-VYIVERLFSSSLVVVVSQSMP--RR-MNVYH
   WD 3   90-127    FK-------------K------GTEICN----YSYS-NNILAVRLNRQRLVVCL---E--ES-IYIHN
   WD 4  134-174    -L-------------K------TLLNTP-----SNP-SGLCALSINHSNSFLAYPGSDTIGE-IIVYD
   WD 5  178-217    -L-------------S------TVTMIP-----AHD-SPLAAITFSASGTKLASASER--GTVIRVFS
   WD 6  218-262    IP-------------E------GLRLFEFRRGMKRY-VNISSLSFSPDAQFLCASSNT--ET-VHIFK
   WD 7  266-305    -H-------------S------PSGEEE-----APSWSAYVGKMFTAASSYLPAQVSG--MM-SQDRA
   WD 8  306-344    -F-------------A------TVRLQM-----AGQ-RNVCALATIQKLPRLLVASSD--GQ-LFIYN
   WD 9  363-415    GSDKEWEETNQSDMTE------APQACQ-----SYA-ATVAIPTSGPVTATLTGYSED--GG-AKKGE

   WD40 Template    TG-------------E------CLRTLS-----GHT-SGVTSVSFSPDGKRLVSGSED--GT-IKVWD