Input parameters:

  Query = ENSDARP00000060250 (Len=431)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000060250, Len=431):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSAPVEVVLSADSAGQLFNCAVYDPHTGSEFLSYRGGNTSSRSLTILNGEYILGAQLGKNYINVWEIQRKDQLQQKIVCP 80  
WD40-rpts                                 (_________________WD 1________________)   (__________

Query       81 GIVTCLCASPDGLYVLAGIAEAIYLWEVSTGNLLAILSRHFQDLSCIKFTDDSSHFVSGGKDNLAFIWNLSSVVQLDSSR 160 
WD40-rpts      ______WD 2________________)   (_________________WD 3________________)           

Query      161 TPEPRHILSRHSLPITDIHCGLMGPQARVATASLDQTVKVWEISSGEMLLSVLFDVGIMSVTFDPCEYFLFCGGSDGNIF 240 
WD40-rpts       (__________________WD 4_________________)   (________________WD 5______________

Query      241 QVSLCSTSLSRDKTFQSDSEGNQVFKGHRNLVTCLSVSMDGTVLLSGSNDETVRMWDVQSKQCIWTINHRGPVTNAAIIP 320 
WD40-rpts      __)               (_________________WD 6________________)   (________________WD 

Query      321 APANMFLSDSHPAVPLPRFSRHLNPSEQGDGTGTGGMSLRLGANTQEPEGTYLEKAEELYSLMCAVTDKSVFGDGENTKV 400 
WD40-rpts      7________________)                            (________________WD 8_____________

Query      401 RVSELEEEVRTLKKINKDLYEFSTQLLTKPN 431 
WD40-rpts      ___)                           

8 WD40-repeats found in QUERY=ENSDARP00000060250 (Len=431):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    28-66       8.19  453.01  4.9e-05       17.5%     54.50
  WD 2:  Seg  7    70-107      7.31  416.70  0.00015       25.0%     56.07
  WD 3:  Seg 11   111-149      9.75  517.34  6.6e-06       30.0%     54.28
  WD 4:  Seg 14   162-202      7.37  419.17  0.00014       32.5%     49.67
  WD 5:  Seg 18   206-243      7.60  428.72  0.00010       32.5%     58.91
  WD 6:  Seg 22   259-297      9.32  499.52  1.2e-05       42.5%     51.53
  WD 7:  Seg 26   301-338      7.09  407.48  0.00020       15.0%     45.11
  WD 8:  Seg 31   367-404      5.56  344.27  0.00143       10.0%     49.04

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   28-66     GSEFLSYRGGNTSSRSLTILNGE--YILGAQLGKNYINVWE
   WD 2   70-107    KDQLQQKIVCPGIVTCLCASPDG--LYVLAGI-AEAIYLWE
   WD 3  111-149    GNLLAILSRHFQDLSCIKFTDDS--SHFVSGGKDNLAFIWN
   WD 4  162-202    PEPRHILSRHSLPITDIHCGLMGPQARVATASLDQTVKVWE
   WD 5  206-243    GEMLLSVLFDV-GIMSVTFDPCE--YFLFCGGSDGNIFQVS
   WD 6  259-297    SEGNQVFKGHRNLVTCLSVSMDG--TVLLSGSNDETVRMWD
   WD 7  301-338    KQCIWTI-NHRGPVTNAAIIPAP--ANMFLSDSHPAVPLPR
   WD 8  367-404    EPEGTYLEKAEELYSLMCAVTDK--SVFGDGE-NTKVRVSE

   WD40 Template    GECLRTLSGHTSGVTSVSFSPDG--KRLVSGSEDGTIKVWD