Input parameters:

  Query = ENSDARP00000060977 (Len=315)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000060977, Len=315):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAFPQPRPQAPQLPQHLWRTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYTGHGYEVLDADGSYDNS 80  
WD40-rpts                        (_______________WD 1______________)   (_________________WD 2__

Query       81 QLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRSRRMEPIQILDESQDGISSLK 160 
WD40-rpts      ______________)   (_________________WD 3________________)     (________________W

Query      161 VSEHELLTGSVDGRVRRYDLRMGQLQVDYIGSPITCVCFSRDGQCTLSSSLDSTVRLLDKSTGEMLGEYSGHVNKGYKLD 240 
WD40-rpts      D 4_______________)(_________________WD 5_________________)   (_________________

Query      241 CCLTDKDTHVLSCSEDGHVYYWDLVEGSLTLKLPVGKAVVQSLSFHPTEPRLLTSMEGRVQVWGAEPEDTAENES 315 
WD40-rpts      _WD 6_________________)   (________________WD 7________________)           

7 WD40-repeats found in QUERY=ENSDARP00000060977 (Len=315):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    19-53       8.69  473.59  2.6e-05       27.5%     48.44
  WD 2:  Seg  4    57-95      10.06  530.13  4.5e-06       37.5%     57.06
  WD 3:  Seg  8    99-137     10.60  552.34  2.2e-06       40.0%     55.04
  WD 4:  Seg 12   143-179      7.64  430.39  9.8e-05       27.5%     47.44
  WD 5:  Seg 16   180-219      8.33  458.90  4.1e-05       30.0%     52.73
  WD 6:  Seg 20   223-263      8.27  456.16  4.4e-05       32.5%     56.67
  WD 7:  Seg 24   267-304      7.69  432.14  9.3e-05       30.0%     52.73

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   19-53     -----RTVDCQQGAV--RAVRFNADGNYLLTCGSDKSLKLWS
   WD 2   57-95     -GTLLKTYTGHGYEV--LDADGSYDNSQLCSCSSDKTVILWD
   WD 3   99-137    -GQVTRKLRGHAGKV--NCVQFNEEATVMLSGSIDGTVRCWD
   WD 4  143-179    -MEPIQILDESQDGI--SSLKVSEHE--LLTGSVDGRVRRYD
   WD 5  180-219    LRMGQLQVDYIGSPI--TCVCFSRDGQCTLSSSLDSTVRLLD
   WD 6  223-263    -GEMLGEYSGHVNKGYKLDCCLTDKDTHVLSCSEDGHVYYWD
   WD 7  267-304    -GSLTLKLPVGKAVV--QSLSFHPTEPRLLTSM-EGRVQVWG

   WD40 Template    TGECLRTLSGHTSGV--TSVSFSPDGKRLVSGSEDGTIKVWD