Input parameters:

  Query = ENSDARP00000061000 (Len=317)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000061000, Len=317):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTEQMTVRGTLKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 80  
WD40-rpts         (__________________WD 1_________________)        (_________________WD 2______

Query       81 GSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNS 160 
WD40-rpts      __________)   (_________________WD 3________________)    (__________________WD 4

Query      161 SNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDTINALC 240 
WD40-rpts      _________________)   (_________________WD 5________________)   (________________

Query      241 FSPNRYWLCAATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRVWQVTIGTR 317 
WD40-rpts      WD 6_______________)            (_________________WD 7________________)      

7 WD40-repeats found in QUERY=ENSDARP00000061000 (Len=317):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     4-44       8.70  474.01  2.5e-05       32.5%     56.15
  WD 2:  Seg  5    53-91      10.13  532.99  4.1e-06       45.0%     55.46
  WD 3:  Seg  9    95-133     10.84  562.31  1.6e-06       50.0%     56.05
  WD 4:  Seg 13   138-178      8.07  448.08  5.7e-05       32.5%     52.93
  WD 5:  Seg 17   182-220      9.89  523.28  5.5e-06       35.0%     54.40
  WD 6:  Seg 21   224-260      6.74  393.05  0.00031       32.5%     54.37
  WD 7:  Seg 25   273-311      7.76  435.01  8.5e-05       27.5%     43.81

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    4-44     QMTVRGTLKGHSGWVTQIATTPQFPDM--ILSASRDKTIIMWK
   WD 2   53-91     -GIPQRALRGHSHFVSDVVISSD-GQF--ALSGSWDGTLRLWD
   WD 3   95-133    -GTTTRRFVGHTKDVLSVAFSAD-NRQ--IVSGSRDKTIKLWN
   WD 4  138-178    -CKYTIQDDSHTEWVSCVRFSPN-SSNPIIVSCGWDKMVKVWN
   WD 5  182-220    -CKLKTNHIGHTGYLNTVTVSPD-GSL--CASGGKDGQAMLWD
   WD 6  224-260    -GKHLYTLDGGDT-INALCFSPN-RYW--LCAAT-GPSIKIWD
   WD 7  273-311    -DIITTNSKAEPPQCTSLAWSAD-GQT--LFAGYTDNLIRVWQ

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPD-GKR--LVSGSEDGTIKVWD