Input parameters:

  Query = ENSDARP00000061774 (Len=512)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000061774, Len=512):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVCSLSWSRDGHK 80  
WD40-rpts                   (_________________WD 1________________)   (_________________WD 2___

Query       81 LVSASTDNIVSQWDVLTGDCDQRFRFPSPILKLQYHPRDMNKVLVCPMKSAPVLLTLSDSKHVVLPVDDDSDLNVVAAFD 160 
WD40-rpts      _____________)   (_________________WD 3_________________)   (_________________WD

Query      161 RRGEYIYTGNAKGKILVLNTDTQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE 240 
WD40-rpts       4________________)(_____________________WD 5____________________)              

Query      241 PMQKLQDLVNRTPWKRCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSI 320 
WD40-rpts            (______________WD 6______________)   (_________________WD 7_______________

Query      321 WAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKSEPEQTGADAAEDEEVDVTSVDPIPAFCSSDEELEDYKALL 400 
WD40-rpts      _)                  (_________________WD 8________________)   (_________________

Query      401 YLPIAPEVEDPEENPFGPPPDATAQNASTDDGSTHTGPGDKKRHPSADGAPPKKKIRTTTIELQGVPSDEVHPLLGVKGD 480 
WD40-rpts      WD 9________________)                                                           

Query      481 SKSKKKAAGRPKGSKGNLVAAVYKQHEVQGLD 512 
WD40-rpts                                      

9 WD40-repeats found in QUERY=ENSDARP00000061774 (Len=512):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    14-52       7.49  424.18  0.00012       27.5%     45.78
  WD 2:  Seg  5    56-94       9.87  522.50  5.6e-06       37.5%     52.79
  WD 3:  Seg  9    98-137      5.29  332.99  0.00202       17.5%     50.37
  WD 4:  Seg 13   141-179      8.26  455.68  4.5e-05       15.0%     56.82
  WD 5:  Seg 17   180-226      8.18  452.38  5.0e-05       25.0%     47.31
  WD 6:  Seg 22   247-280      4.95  319.03  0.00312       20.0%     45.55
  WD 7:  Seg 25   284-322      6.41  379.27  0.00048       22.5%     53.83
  WD 8:  Seg 31   341-379      6.11  367.00  0.00070       10.0%     18.56
  WD 9:  Seg 32   383-421      5.66  348.34  0.00126        7.5%     -1.33

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   14-52     -PE-------EADGTLDCISM-ALTCTFNRW--GTLLAVGC-NDGRIVIWD
   WD 2   56-94     -RG-------IAKIISAHIHP-VCSLSWSRD--GHKLVSAS-TDNIVSQWD
   WD 3   98-137    -GD-------CDQRFRFP-SP-ILKLQYHPRDMNKVLVCPM-KSAPVLLTL
   WD 4  141-179    -KH-------VVLPVDDDSDL-NVVAAFDRR--GEYIYTGN-AKGKILVLN
   WD 5  180-226    TDTQDLVASFRVTTGTSNTTA-IKSIEFARK--GSCFLINT-ADRIIRVYD
   WD 6  247-280    --------------DLVNRTP-WKRCCFSGD--GEYIVAGSARQHALYIWE
   WD 7  284-322    -GN-------LVKILHGTRGELLLDVAWHPV--RPIIASIS--SGVVSIWA
   WD 8  341-379    ENV-------EYEE-RESEFD-IEDEDKSEP--EQTGADAA-EDEEVDVTS
   WD 9  383-421    -IP-------AFCSSDEELED-YKALLYLPI--APEVEDPE-ENPFGPPPD

   WD40 Template    TGE-------CLRTLSGHTSG-VTSVSFSPD--GKRLVSGS-EDGTIKVWD