Input parameters:

  Query = ENSDARP00000062413 (Len=314)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000062413, Len=314):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKSFKSPGRHGYAVEISPFLPSTMACASSQYYGIAGCGTLFVLEQRETDVSLVKSFDWNDGLFDVTWSENNEHVLVTGGG 80  
WD40-rpts      (_________________WD 1________________)         (_________________WD 2__________

Query       81 DGSLQIWDTANPQGLLQVLKGHTQEVYSVDWSQTRAENLLVSGSWDHTAKVWDPVQCQLVNSLQGHEGVIYSTIWSPHIP 160 
WD40-rpts      _______)(____________________WD 3___________________)   (_________________WD 4__

Query      161 ACFASASGDGTLRVWDVKAGSCRLVIPAHKSEILSCDWCKYDQNVLVTGAVDCSLRVWDLRNIRHPVAQMSGHSYAIRRV 240 
WD40-rpts      _______________)   (_________________WD 5_________________)    (________________

Query      241 KFCPFYKTVLASCSYDFTVRFWDYSKSQALLETLEHHSEFVCGLDFNLHIPNQVVDCSWDETVKVFSPSSLAAV 314 
WD40-rpts      _WD 6_________________) (___________________WD 7__________________)       

7 WD40-repeats found in QUERY=ENSDARP00000062413 (Len=314):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-39       5.43  339.07  0.00168       15.0%     32.60
  WD 2:  Seg  5    49-88       7.90  441.07  7.1e-05       27.5%     56.17
  WD 3:  Seg  9    89-133      8.73  475.31  2.4e-05       52.5%     47.45
  WD 4:  Seg 12   137-176      8.68  473.37  2.6e-05       35.0%     56.92
  WD 5:  Seg 16   180-219      8.65  472.12  2.7e-05       32.5%     54.72
  WD 6:  Seg 20   224-263      8.10  449.44  5.5e-05       35.0%     50.55
  WD 7:  Seg 23   265-307      7.06  406.40  0.00021       27.5%     46.28

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-39     -MK---SF---KSPGRHGYAVEISPFLP-S--TMA-CASSQYYGIAGCGT
   WD 2   49-88     -DV---SL---VKSFDWNDGLFDVTWSE-N--NEHVLVTGGGDGSLQIWD
   WD 3   89-133    TANPQGLL---QVLKGHTQEVYSVDWSQ-TRAENL-LVSGSWDHTAKVWD
   WD 4  137-176    -CQ---LV---NSLQGHEGVIYSTIWSP-H-IPAC-FASASGDGTLRVWD
   WD 5  180-219    -GS---CR---LVIPAHKSEILSCDWCKYD--QNV-LVTGAVDCSLRVWD
   WD 6  224-263    -RH---PV---AQMSGHSYAIRRVKFCP-F--YKTVLASCSYDFTVRFWD
   WD 7  265-307    -SK---SQALLETLEHHSEFVCGLDFNL-H-IPNQ-VVDCSWDETVKVFS

   WD40 Template    TGE---CL---RTLSGHTSGVTSVSFSP-D--GKR-LVSGSEDGTIKVWD