Input parameters:

  Query = ENSDARP00000062703 (Len=798)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000062703, Len=798):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSGSNSYRLRSSLPAHDMDVRGLAAVAFPDGAFVSVSRDRTARVWVPNPSENQSFTEMHCMNGHSNFVSCVCIISPNETY 80  
WD40-rpts           (__________________WD 1_________________)        (___________________WD 2__

Query       81 PRGLIATGGHDNNICVFSLDRPDPLFTLKGHKNTVCTLSAGKFGTILSGSWDTTAKVWLGEKCMMTLQGHTAAVWAVLIL 160 
WD40-rpts      _________________)   (________________WD 3________________)(_________________WD 

Query      161 PEQGLMLSGSADKTIKLWKAGRCEKTYTGHEDCVRGLAVINDVEFFSCSNDASIRRWMVTGECVQVYYGHTNYIYSIAVF 240 
WD40-rpts      4_________________)(_________________WD 5________________)  (_________________WD

Query      241 PNGKDFISTGEDRTLRVWKEGECSQTIRLPAQSVWCCCILPNGDIAVGASDGIIRVFTESEDRVASAQDLQAFEDELSKA 320 
WD40-rpts       6________________)(_________________WD 7________________)                      

Query      321 VIDPKTGDLGDIKIEELPGREHLDEPGNRDGQTRLIKEGSNVEAYQWSMSDGRWMKIGYVVGGSSQQSSKRVMYEGKEYD 400 
WD40-rpts                                                      (________________WD 8___________

Query      401 FVFTIDVNEGGPPMKLPYNVTDDPWLVAHNFLQKNDLSPMFLDQVANFIIENTKGHTLGAAPASAADPFTGAGRYIPGSG 480 
WD40-rpts      _____)                                                                          

Query      481 GNGQQFGADPFTGAGRYIPGSGSTGTAPSGGADPFTGGSAYSSPSLPKSTTNIFFPNTDGVMFEQSNTAQILGKLRELNT 560 
WD40-rpts                                                                                      

Query      561 SAPADHKLSDAALDCLEKLLNLVTELPNLEQPTAEQITVLWRACHWPEDIVFPVLDILRLAVRHPEVNAHLCGGTEGASL 640 
WD40-rpts                                                                                      

Query      641 CNHLLGLMSPEGKAANQMLALRTLCNCFTASHGRALLLGQRDAVLSRAGDLRTVCNKNIHVALATLVLNYAGRLYGQPAE 720 
WD40-rpts                                                                                      

Query      721 IEAKAQCLSVASTALEVVQDKEAVFRLLVALGTTVSGDSTAKDLARSLGVNSQISKYARVSDPAKVGECCRLVLDELQ 798 
WD40-rpts                                                                                    

8 WD40-repeats found in QUERY=ENSDARP00000062703 (Len=798):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     6-46       6.18  370.06  0.00064       25.0%     50.89
  WD 2:  Seg  5    55-98       5.46  340.38  0.00161       20.0%     53.65
  WD 3:  Seg  9   102-139      7.72  433.61  8.9e-05       40.0%     50.06
  WD 4:  Seg 13   140-179     10.95  567.16  1.4e-06       42.5%     54.88
  WD 5:  Seg 17   180-218      8.62  470.86  2.8e-05       30.0%     51.18
  WD 6:  Seg 21   221-259     10.16  534.17  3.9e-06       40.0%     55.57
  WD 7:  Seg 25   260-298      8.10  449.11  5.5e-05       30.0%     54.24
  WD 8:  Seg 33   369-406      2.92  235.43  0.04104       15.0%     26.62

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    6-46     SYRLRSSLPAHDMDVRGLAAVAFPDG-----AFVSVSRDRTARVWV
   WD 2   55-98     -FTEMHCMNGHSNFVSCVCI-ISPNETYPRGLIATGGHDNNICVFS
   WD 3  102-139    -PDPLFTLKGHKNTVCTLSA-GKFGT------ILSGSWDTTAKVWL
   WD 4  140-179    GEKCMMTLQGHTAAVWAVLI-LPEQG-----LMLSGSADKTIKLWK
   WD 5  180-218    AGRCEKTYTGHEDCVRGLAV-INDVE------FFSCSNDASIRRWM
   WD 6  221-259    -GECVQVYYGHTNYIYSIAV-FPNGK-----DFISTGEDRTLRVWK
   WD 7  260-298    EGECSQTIRLPAQSVWCCCI-LPNGD------IAVGASDGIIRVFT
   WD 8  369-406    MSDGRWMKIGYV--VGGSSQ-QSSKR-----VMYEGKEYDFVFTID

   WD40 Template    TGECLRTLSGHTSGVTSVSF-SPDGK-----RLVSGSEDGTIKVWD