Input parameters:

  Query = ENSDARP00000063737 (Len=387)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000063737, Len=387):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEDDAPVIYGLEFQARALTAQTAETDAIRFLVGTQSLKFDNQIHIIDFDDENNMINKSVLLHDAGEIWHISGSPADKAVL 80  
WD40-rpts         (___________________WD 1___________________)  (___________________WD 2_______

Query       81 TTCYNKTSESRVLTCAAVWRMPPEWESGSHESPDDSSNNPQTLELLCHLDNSAHGSMACVLWEPMGDGKRVISLAENHVL 160 
WD40-rpts      ___________)(_______________WD 3______________)  (______________WD 4____________

Query      161 LWDLQESSAKATISSSATLEGKGQLKFTAGKWSPHHNCTQLATANDTAIRGWDLRSMSQIYCIENAHGQLVRDLDFNPNK 240 
WD40-rpts      __)   (_____________________WD 5____________________)    (_________________WD 6_

Query      241 QYYLASCGDDCKVKFWDVRHISEPVKCLEEHSHWVWSVRYNHSHDQLLLTASSDSRVILSNMVSISSEPFGHLVDDDDLS 320 
WD40-rpts      ________________)    (_________________WD 7_________________)(_________________W

Query      321 DPEENQQEAKGKEPLQDSIISTYEEHEDSVYAVEWSAADPWLFASLSYDGRLVINRVPRALKYRILL 387 
WD40-rpts      D 8_________________)                                              

8 WD40-repeats found in QUERY=ENSDARP00000063737 (Len=387):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     4-47       5.94  359.95  0.00088       20.0%     35.41
  WD 2:  Seg  5    50-92       6.90  399.71  0.00026       15.0%     49.09
  WD 3:  Seg  8    93-127      4.65  306.71  0.00457       15.0%     21.50
  WD 4:  Seg 10   130-163      5.01  321.70  0.00287       15.0%     43.95
  WD 5:  Seg 13   167-213      5.37  336.29  0.00183       22.5%     53.47
  WD 6:  Seg 17   218-257      6.99  403.34  0.00023       25.0%     52.81
  WD 7:  Seg 20   262-301      6.85  397.43  0.00027       22.5%     51.34
  WD 8:  Seg 24   302-341      5.02  322.22  0.00283       12.5%      2.09

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    4-47     DAP---VIYGLEFQAR-------ALTAQTAET-DAI-RFLVGTQSLKFDNQIHIID
   WD 2   50-92     DENNMINKSVLLHDAG-------EIWHISGSP-ADK-AV----LTTCYNKTSESRV
   WD 3   93-127    -LT---CAAVWRMPPE-------WESGSHESP-DD---------SSNNPQTLELLC
   WD 4  130-163    DN----------SAHG-------SMACVLWEP-MGDGKR----VISLAENHVLLWD
   WD 5  167-213    -SS---AKATISSSATLEGKGQLKFTAGKWSP-HHNCTQ----LATANDTAIRGWD
   WD 6  218-257    -SQ---IYCIENAHGQ-------LVRDLDFNP-NKQYYL----ASCGDDCKVKFWD
   WD 7  262-301    -SE---PVKCLEEHSH-------WVWSVRYNHSHDQ-LL----LTASSDSRVILSN
   WD 8  302-341    MVS---ISSEPFGHLV-------DDDDLSDPE-ENQ-QE----AKGKEPLQDSIIS

   WD40 Template    TGE---CLRTLSGHTS-------GVTSVSFSP-DGK-RL----VSGSEDGTIKVWD