Input parameters:

  Query = ENSDARP00000064438 (Len=372)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000064438, Len=372):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDCISAKYISQKISKTRWRPVSAASLQQPEVFATGSWDNENNKVSIWSVGDRGGSTLDGDLDEEPQLLCDSQHEGDVMDL 80  
WD40-rpts      (_____________________WD 1_____________________)(________________________WD 2___

Query       81 QFLDQDRLVSASSSGAVSIFKLQSDCQALSLAHVWERAHRCSCDNAPCTAIVCRSPEIVSVGEDGRVILYKADQAEVTRV 160 
WD40-rpts      ____________________)                (______________WD 3______________)   (_____

Query      161 IENADSSTIHAVTFLRTTEVLTVNSIGQLKMWDFRQQSDSPAQILSLTGDRVPLHCVDKHPNQQHIVATGGQDGMLCIWD 240 
WD40-rpts      ____________WD 4________________)       (_________________WD 5_________________)

Query      241 VRQGNTPFSLTEAHSAEMWEVHFHPSNPNHLFTCSEDGSLLHWESTSGSDVSTLLQKGWHSRVVSQSAISLAGENDSAVS 320 
WD40-rpts      (___________________WD 6___________________)   (_______________WD 7_____________

Query      321 AWLAGDSSKSRLEATHMLPSQTLSVNSLDVLEQCLVCGTDGEALYIHRQVPV 372 
WD40-rpts      __)   (__________________WD 8__________________)    

8 WD40-repeats found in QUERY=ENSDARP00000064438 (Len=372):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-48       3.76  269.92  0.01426       12.5%     49.26
  WD 2:  Seg  4    49-101      6.49  382.61  0.00043       30.0%     55.77
  WD 3:  Seg 10   118-151      7.06  406.39  0.00021       12.5%     43.04
  WD 4:  Seg 14   155-193      6.50  383.24  0.00043       22.5%     54.43
  WD 5:  Seg 18   201-240      7.78  435.90  8.3e-05       22.5%     53.82
  WD 6:  Seg 22   241-284      7.79  436.46  8.2e-05       25.0%     52.54
  WD 7:  Seg 26   288-323      6.36  377.49  0.00051       15.0%     44.27
  WD 8:  Seg 30   327-368      6.53  384.36  0.00041       15.0%     43.87

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-48     MDC--------------ISAKY-ISQK--ISKTR---WRP-VSAASLQQPEV-FATGSWDNENNKVSIWS
   WD 2   49-101    VGDRGGSTLDGDLDEEPQLLCD-SQHEGDVMDLQ---FLD-QD--------R-LVSASSS---GAVSIFK
   WD 3  118-151    --------------------AH-RCSCDNAPCTA---IVC-RS-------PE-IVSVGED---GRVILYK
   WD 4  155-193    -AE--------------VTRVIENADSSTIHAVT---FLR-TT-------E--VLTVNSI---GQLKMWD
   WD 5  201-240    -PA--------------QILSL-TGDRVPLHCVD---KHP-NQ-------QHIVATGGQD---GMLCIWD
   WD 6  241-284    VRQ-----------GNTPFSLT-EAHSAEMWEVH---FHPSNP-------NH-LFTCSED---GSLLHWE
   WD 7  288-323    -GS--------------DVSTL-LQK---GWHSR---VVS-QS-------AI-SLAGEND---SAVSAWL
   WD 8  327-368    -SS--------------KSRLE-ATHMLPSQTLSVNSLDV-LE-------QC-LVCGTDG---EALYIHR

   WD40 Template    TGE--------------CLRTL-SGHTSGVTSVS---FSP-DG-------KR-LVSGSED---GTIKVWD