Input parameters:

  Query = ENSDARP00000065337 (Len=368)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000065337, Len=368):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSECFTVMGDHIELVAGCYEQIVFGYRVCPADEEWTIEPTFTHHAHTASLNAVSSSNQFIATGSKDETIQLYDMCKKTEH 80  
WD40-rpts      (___________WD 1__________)          (_______________WD 2_______________)   (___

Query       81 GALLHHDGTISCLEFYGTSHLLSGGQDGLICVWSTKKWECLKTIRAHKGQVTSLSVHPSGKLALSVGTDKTLRTWNLIEG 160 
WD40-rpts      _____________WD 3________________)   (_________________WD 4________________)(___

Query      161 RSAFIKNIKQNAEIVLWSPDGDKYAVVVNDKVDIYTLDSATIIGTIAFTKRISCLKFLKNSLLAVGGDDESVRIYDVTSQ 240 
WD40-rpts      ______________WD 5_________________)(_________________WD 6_________________)   (

Query      241 KCVCEFKAHENRVKAIESFMKDDFCVLVTASNDGFIKLWKLNLESIESPTLLGQLNTTARLTCLCVWMPGETKETAEQPA 320 
WD40-rpts      __________________WD 7_________________)(____________________WD 8_______________

Query      321 QATTSEDVLDPLVPVRSKRVRILGEEVIMEDEKGSKTQGKKKKRQKVQ 368 
WD40-rpts      _____)                                          

8 WD40-repeats found in QUERY=ENSDARP00000065337 (Len=368):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-27       3.74  268.95  0.01469       15.0%     39.56
  WD 2:  Seg  5    38-73       8.44  463.14  3.6e-05       22.5%     47.59
  WD 3:  Seg  9    77-114      7.83  438.05  7.8e-05       27.5%     54.09
  WD 4:  Seg 13   118-156     10.58  551.54  2.3e-06       40.0%     57.96
  WD 5:  Seg 17   157-196      6.62  388.27  0.00036       17.5%     56.94
  WD 6:  Seg 21   197-236      6.50  383.20  0.00043       15.0%     56.43
  WD 7:  Seg 25   240-280      8.42  462.36  3.6e-05       30.0%     56.93
  WD 8:  Seg 29   281-326      5.59  345.64  0.00137       15.0%     27.40

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-27     MSE---C----------------FT--VMGDHIELVAGCYEQIVFGYR
   WD 2   38-73     -------EPTFTHH---AHTASLNA--VSSSNQFIATGSKDETIQLYD
   WD 3   77-114    -KT---EHGALLHH---DGTISCLE--FYGTSH-LLSGGQDGLICVWS
   WD 4  118-156    -WE---CLKTIRAH---KGQVTSLS--VHPSGKLALSVGTDKTLRTWN
   WD 5  157-196    LIE--GRSAFIKNI---KQNAEIVL--WSPDGDKYAVVVND-KVDIYT
   WD 6  197-236    LDS--ATIIGTIAF---TKRISCLK--FLKNS-LLAVGGDDESVRIYD
   WD 7  240-280    -QK---CVCEFKAH---ENRVKAIESFMKDDFCVLVTASNDGFIKLWK
   WD 8  281-326    LNLESIESPTLLGQLNTTARLTCLC--VWMPGETKETAEQPAQATTSE

   WD40 Template    TGE---CLRTLSGH---TSGVTSVS--FSPDGKRLVSGSEDGTIKVWD