Input parameters:

  Query = ENSDARP00000069897 (Len=450)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000069897, Len=450):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MADVTSEQYFIERFSVTCSKPVSHLQLACCPSHCAIPWKDKNIRIYENKINNLEPPLELTGHHGDVSAMVFGTERDQPIL 80  
WD40-rpts      (_____________________WD 1____________________)     (_________________WD 2______

Query       81 CSASEDYVIVWDINRCYRQIKEGGIASGRVVGTLLGRVVYLSLCPMSAKVAACSGSRVVLLNAEREEVLGVLKAHLGPVT 160 
WD40-rpts      ___________)        (___________________WD 3__________________)  (______________

Query      161 ASEFCPWDVNLLISISEDRTFKIWDVKKGGILFESAVLSAYPLLSLSFMKQNGQFITGSGDGQLWCYTLPVDHKCRLVTK 240 
WD40-rpts      ___WD 4_________________)    (_________________WD 5________________)   (________

Query      241 LDLSKLEQKHERNLRMISPPQSRTDGTARCDERGAVETAKPVLRIWPQTPKINHASLQQRGSYVWIGSSDGLCLLDLDTS 320 
WD40-rpts      __________WD 6_________________)      (________________WD 7________________)   (

Query      321 ELLSFLPLKGDLSISIAGSWVISEGLDGSMRCLVSSLFETSVVLLVVNGVRLDELCLRMAKSFSVEEQLSVMPSSPLMTT 400 
WD40-rpts      _______________WD 8______________)                                              

Query      401 SPLKAELAKKGPKPQRKGGWSSQNHTKHTQAFCCQIHKSPSLDLQAFQYH 450 
WD40-rpts                                                        

8 WD40-repeats found in QUERY=ENSDARP00000069897 (Len=450):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-47       6.00  362.46  0.00081       10.0%     58.39
  WD 2:  Seg  5    53-92       6.18  369.75  0.00065       37.5%     49.25
  WD 3:  Seg 10   101-143      4.95  319.08  0.00312       10.0%     41.78
  WD 4:  Seg 14   146-185      9.17  493.34  1.4e-05       45.0%     56.05
  WD 5:  Seg 18   190-228      8.33  458.84  4.1e-05       20.0%     55.66
  WD 6:  Seg 22   232-272      4.59  304.16  0.00495       10.0%     16.55
  WD 7:  Seg 27   279-316      7.15  410.11  0.00018       20.0%     52.90
  WD 8:  Seg 31   320-354      5.53  343.02  0.00148       22.5%     46.18

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-47     MADVTSEQYFIERF---SVTCSKPVSHLQLAC--CPSHCAI--PWKDKNIRIYE
   WD 2   53-92     -LE-------PPLE---LTGHHGDVSAMVFGTERDQPILCS--ASED-YVIVWD
   WD 3  101-143    KEG-------GIASGRVVGTLLGRVVYLSLCP--MSAKVAA--CSGSRVVLLNA
   WD 4  146-185    -EE-------VLGV---LKAHLGPVTASEFCP-WDVNLLIS--ISEDRTFKIWD
   WD 5  190-228    -GI-------LFES---AVLSAYPLLSLSFMK--QNGQFIT--GSGDGQLWCYT
   WD 6  232-272    -DH-------KCRL---VTKLDLSKLEQKHER--NLRMISPPQSRTDGTARCDE
   WD 7  279-316    -AK-------PVLR---IWPQTPKINHASLQQ--RGSYVWI--GSSDGLC-LLD
   WD 8  320-354    -SE-------LLSF---LPLKG----DLSISI--AGSWVIS--EGLDGSMRCLV

   WD40 Template    TGE-------CLRT---LSGHTSGVTSVSFSP--DGKRLVS--GSEDGTIKVWD