Input parameters:

  Query = ENSDARP00000070070 (Len=535)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000070070, Len=535):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDTDKSDLSLETMQLLQERTPPQNPGMDGSVLRTSRRIKEKQNQRKKQILPPKCLTFRSEVKSTRRAVKRRISGSEKEKE 80  
WD40-rpts                                                                                      

Query       81 VKRSKADPDHESLPGYREGLSEYQLERLENIRKNQAFLNSLNLTEISEALRPKQKPTQKGLKKEKTQVEMLPVRKSLRLQ 160 
WD40-rpts                                                                                      

Query      161 NKGPQSTTATEFTFPTTYELEKEAKPPGPIPLDPINLDEDATLPDDLLDVWNEVPLEQSTGTPDLKSYERMLKKLSIDDS 240 
WD40-rpts                                                                                (_____

Query      241 RVVKVVKERICCAAFHPSSNLLMAAGDKYGHLGLWRPDAEWGDDGVVCFEPHSRAITALAFTSQPCNLITASYDGSARSM 320 
WD40-rpts      _____________WD 1__________________)      (_________________WD 2________________

Query      321 DLEKAVFDEVYRSSSSLKSFDFLSSDCSTLLFGEWNGDVAIVDRRTGNSCESLHAMTAAPLRGVHVHPVQQHYFLVAESS 400 
WD40-rpts      )   (_________________WD 3________________)   (_________________WD 4____________

Query      401 FVNIYDLRHLKKRNSPAVCELYGHSRSTSSAFFSPLTGSRVLTTCMDDCIRVFDSSQIAGSIPALTSIRHNMQTGRWLSR 480 
WD40-rpts      _____)        (_________________WD 5_________________)(_______________________WD

Query      481 LCAVWDPKHQECFVIGTMDRPRKIKHSTLAGTLCLEAMQVGGCTSTLTDLSTRKD 535 
WD40-rpts       6_______________________)                             

6 WD40-repeats found in QUERY=ENSDARP00000070070 (Len=535):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1   235-276      6.42  380.06  0.00047       17.5%     44.39
  WD 2:  Seg  5   283-321      8.65  472.15  2.7e-05       20.0%     52.56
  WD 3:  Seg  9   325-363      7.86  439.14  7.5e-05       17.5%     58.48
  WD 4:  Seg 13   367-406      7.09  407.49  0.00020       17.5%     48.19
  WD 5:  Seg 16   415-454      7.99  444.83  6.3e-05       32.5%     49.05
  WD 6:  Seg 20   455-506      4.89  316.57  0.00337       20.0%     45.47

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  235-276    LSIDD-----SRVVKVVK-------ER-ICCAAFHP-SSNLLMAAGDKYGHLGLWR
   WD 2  283-321    -D-DG-----VVCFEPHS-------RA-ITALAFTS-QPCNL-ITASYDGSARSMD
   WD 3  325-363    -A-VF-----DEVYRSSS-------SL-KSFDFLSS-DCSTL-LFGEWNGDVAIVD
   WD 4  367-406    -G-NS-----CESLHAMT-------AAPLRGVHVHP-VQQHY-FLVAESSFVNIYD
   WD 5  415-454    -S-PA-----VCELYGHS-------RS-TSSAFFSPLTGSRV-LTTCMDDCIRVFD
   WD 6  455-506    SS-QIAGSIPALTSIRHNMQTGRWLSR-LCAVWDPK-HQECF-VIGTMDRPRKIKH

   WD40 Template    TG-EC-----LRTLSGHT-------SG-VTSVSFSP-DGKRL-VSGSEDGTIKVWD